RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	MYH6	P13533	1939 aa		6.11	□□□□□ -1.43
SEC13-219	ENST00000492602	MTCL1	Q9Y4B5	1905 aa	Known RBP	6.11	□□□□□ -1.43
SEC13-219	ENST00000492602	NOTCH2	Q04721	2471 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	PLXNB3	Q9ULL4	1909 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	TEX51	A0A1B0GUA7	166 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	TRABD2B	A6NFA1	517 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	ZBTB42	B2RXF5	422 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602		F8W810	466 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	SPECC1L-ADORA2A	F8WAN1	911 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	BACH1	O14867	736 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	FOXP2	O15409	715 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	ATG13	O75143	517 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	EFEMP2	O95967	443 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	RHO	P08100	348 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	DARS	P14868	501 aa	Known RBP	6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	VIPR2	P41587	438 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	CCR10	P46092	362 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	DHPS	P49366	369 aa	Predicted RBP	6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	MLLT6	P55198	1093 aa	Predicted RBP	6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	CREM	Q03060	361 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	TRAF1	Q13077	416 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	AXDND1	Q5T1B0	1012 aa	Predicted RBP	6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	ZKSCAN2	Q63HK3	967 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	PMS2CL	Q68D20	193 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	PDXDC1	Q6P996	788 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	USP17L6P	Q6QN14	398 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	PRSS55	Q6UWB4	352 aa	Predicted RBP	6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	AGMO	Q6ZNB7	445 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	LRRC69	Q6ZNQ3	347 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	GPR155	Q7Z3F1	870 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	ITPRIP	Q8IWB1	547 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	CKAP2L	Q8IYA6	745 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	STAG2	Q8N3U4	1231 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	DEPDC1B	Q8WUY9	529 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	NLRP7	Q8WX94	980 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	CAMK1G	Q96NX5	476 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	HHIP	Q96QV1	700 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	TRAIP	Q9BWF2	469 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	GTPBP2	Q9BX10	602 aa	Known RBP	6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	GPR62	Q9BZJ7	368 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	RSAD1	Q9HA92	442 aa		6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	POLM	Q9NP87	494 aa	Predicted RBP	6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	POLR3B	Q9NW08	1133 aa	Predicted RBP	6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	NXF1	Q9UBU9	619 aa	Known RBP	6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	EVL	Q9UI08	416 aa	Predicted RBP	6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	PIN4	Q9Y237	131 aa	Known RBP	6.1	□□□□□ -1.43
SEC13-219	ENST00000492602	MYBPHL	A2RUH7	354 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	FAM205C	A6NFA0	338 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	KLRF2	D3W0D1	207 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	ARNTL	O00327	626 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	ZNF862	O60290	1169 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	OPHN1	O60890	802 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	ZNF623	O75123	536 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	RAB11FIP3	O75154	756 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	NR1I2	O75469	434 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	TMOD1	P28289	359 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	CTH	P32929	405 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	RAB27A	P51159	221 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	GPC3	P51654	580 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	HAND2	P61296	217 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	MAPK6	Q16659	721 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	VPS53	Q5VIR6	699 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	FAM160B1	Q5W0V3	765 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	EFCAB12	Q6NXP0	572 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	FUT10	Q6P4F1	479 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	MFSD6	Q6ZSS7	791 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	TOGARAM2	Q6ZUX3	1019 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	RALGPS2	Q86X27	583 aa	Predicted RBP	6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	MARCH9	Q86YJ5	346 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	MFSD6L	Q8IWD5	586 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	SIRT2	Q8IXJ6	389 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	YAF2	Q8IY57	180 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	COLGALT2	Q8IYK4	626 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	LRRC71	Q8N4P6	559 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	SMARCD2	Q92925	531 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	CUL5	Q93034	780 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	MTMR8	Q96EF0	704 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	ASB16	Q96NS5	453 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	PIGS	Q96S52	555 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	CLSTN3	Q9BQT9	956 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	SDF4	Q9BRK5	362 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	COLEC11	Q9BWP8	271 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	FSCN3	Q9NQT6	498 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	ECHDC1	Q9NTX5	307 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	IL17B	Q9UHF5	180 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	APOBEC2	Q9Y235	224 aa	Known RBP	6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	EVPL	Q92817	2033 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	CREBBP	Q92793	2442 aa		6.09	□□□□□ -1.43
SEC13-219	ENST00000492602	RELN	P78509	3460 aa		6.09	□□□□□ -1.44
SEC13-219	ENST00000492602	WDR81	Q562E7	1941 aa		6.09	□□□□□ -1.44
SEC13-219	ENST00000492602	COL6A6	A6NMZ7	2263 aa		6.09	□□□□□ -1.44
SEC13-219	ENST00000492602	COL4A2	P08572	1712 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	NUP205	Q92621	2012 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	SALL3	Q9BXA9	1300 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	DOPEY2	Q9Y3R5	2298 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	HEPACAM2	A8MVW5	462 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	ERVH48-1	M5A8F1	160 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	MAGEB2	O15479	319 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	MAFG	O15525	162 aa		6.08	□□□□□ -1.44
SEC13-219	ENST00000492602	SH3BP5	O60239	455 aa		6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms