RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 SPATA31D3P0C874 917 aa19.03■□□□□ 0.64
SGMS1-204ENST00000492601 DSG1Q02413 1049 aa19.03■□□□□ 0.64
SGMS1-204ENST00000492601 KRT79Q5XKE5 535 aa19.03■□□□□ 0.64
SGMS1-204ENST00000492601 SPATA31D4Q6ZUB0 917 aa19.03■□□□□ 0.64
SGMS1-204ENST00000492601 GLYCTKQ8IVS8 523 aa19.03■□□□□ 0.64
SGMS1-204ENST00000492601 SUGP1Q8IWZ8 645 aaKnown RBP19.03■□□□□ 0.64
SGMS1-204ENST00000492601 HASPINQ8TF76 798 aa19.03■□□□□ 0.64
SGMS1-204ENST00000492601 KIFAP3Q92845 792 aa19.03■□□□□ 0.64
SGMS1-204ENST00000492601 ASIC4Q96FT7 647 aa19.03■□□□□ 0.64
SGMS1-204ENST00000492601 TMX3Q96JJ7 454 aa19.03■□□□□ 0.64
SGMS1-204ENST00000492601 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.03■□□□□ 0.64
SGMS1-204ENST00000492601 LIMD1Q9UGP4 676 aa19.03■□□□□ 0.64
SGMS1-204ENST00000492601 ADAM28Q9UKQ2 775 aa19.03■□□□□ 0.64
SGMS1-204ENST00000492601 GDAQ9Y2T3 454 aa19.03■□□□□ 0.64
SGMS1-204ENST00000492601 KIF3AQ9Y496 699 aa19.03■□□□□ 0.64
SGMS1-204ENST00000492601 LAD1O00515 517 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 PTGESO14684 152 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 TADA2AO75478 443 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 GLUD1P00367 558 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 TUSC3Q13454 348 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 HSP90AA2PQ14568 343 aaPredicted RBP19.02■□□□□ 0.64
SGMS1-204ENST00000492601 ZRSR1Q15695 479 aaKnown RBP19.02■□□□□ 0.64
SGMS1-204ENST00000492601 USP41Q3LFD5 358 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 NT5DC1Q5TFE4 455 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 DTHD1Q6ZMT9 781 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 PALB2Q86YC2 1186 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 RIN2Q8WYP3 895 aaPredicted RBP19.02■□□□□ 0.64
SGMS1-204ENST00000492601 SMOC2Q9H3U7 446 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 RXFP1Q9HBX9 757 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 CHST7Q9NS84 486 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 SORCS3Q9UPU3 1222 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 DNM3Q9UQ16 869 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 STK24Q9Y6E0 443 aa19.02■□□□□ 0.64
SGMS1-204ENST00000492601 PDCD11Q14690 1871 aaKnown RBP19.01■□□□□ 0.63
SGMS1-204ENST00000492601 CCDC169A6NNP5 214 aa19.01■□□□□ 0.63
SGMS1-204ENST00000492601 RPL17P18621 184 aaKnown RBP19.01■□□□□ 0.63
SGMS1-204ENST00000492601 GJB2P29033 226 aa19.01■□□□□ 0.63
SGMS1-204ENST00000492601 HOXD11P31277 338 aaPredicted RBP19.01■□□□□ 0.63
SGMS1-204ENST00000492601 EFNA5P52803 228 aa19.01■□□□□ 0.63
SGMS1-204ENST00000492601 MTMR3Q13615 1198 aa19.01■□□□□ 0.63
SGMS1-204ENST00000492601 CCDC149Q6ZUS6 474 aa19.01■□□□□ 0.63
SGMS1-204ENST00000492601 FBXL6Q8N531 539 aa19.01■□□□□ 0.63
SGMS1-204ENST00000492601 USTQ9Y2C2 406 aa19.01■□□□□ 0.63
SGMS1-204ENST00000492601 CACNA1HO95180 2353 aa19■□□□□ 0.63
SGMS1-204ENST00000492601 HIP1RO75146 1068 aa19■□□□□ 0.63
SGMS1-204ENST00000492601 BRD1O95696 1058 aa19■□□□□ 0.63
SGMS1-204ENST00000492601 PDGFBP01127 241 aaPredicted RBP19■□□□□ 0.63
SGMS1-204ENST00000492601 THP07101 528 aa19■□□□□ 0.63
SGMS1-204ENST00000492601 PRPHP41219 470 aa19■□□□□ 0.63
SGMS1-204ENST00000492601 PEX3P56589 373 aa19■□□□□ 0.63
SGMS1-204ENST00000492601 DCAF4L1Q3SXM0 396 aa19■□□□□ 0.63
SGMS1-204ENST00000492601 IER5LQ5T953 404 aa19■□□□□ 0.63
SGMS1-204ENST00000492601 ATF7IP2Q5U623 682 aa19■□□□□ 0.63
SGMS1-204ENST00000492601 PRSS55Q6UWB4 352 aaPredicted RBP19■□□□□ 0.63
SGMS1-204ENST00000492601 KCNK18Q7Z418 384 aa19■□□□□ 0.63
SGMS1-204ENST00000492601 ZDHHC14Q8IZN3 488 aa19■□□□□ 0.63
SGMS1-204ENST00000492601 MMTAG2Q9BU76 263 aaKnown RBP19■□□□□ 0.63
SGMS1-204ENST00000492601 RUSC1Q9BVN2 902 aa19■□□□□ 0.63
SGMS1-204ENST00000492601 KCNH6Q9H252 994 aa19■□□□□ 0.63
SGMS1-204ENST00000492601 UPF2Q9HAU5 1272 aaKnown RBP19■□□□□ 0.63
SGMS1-204ENST00000492601 CCDC195A0A1B0GUA6 201 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 H3BQV1 296 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 K7ERI5 159 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 RFPL2O75678 378 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 KIF4AO95239 1232 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 NPTX2P47972 431 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 NHLH1Q02575 133 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 NAB2Q15742 525 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 RILPL1Q5EBL4 403 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 GLRA4Q5JXX5 417 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 RTP2Q5QGT7 225 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 RINT1Q6NUQ1 792 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 C15orf39Q6ZRI6 1047 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 DAW1Q8N136 415 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 PLCD3Q8N3E9 789 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 ACSF2Q96CM8 615 aaPredicted RBP18.99■□□□□ 0.63
SGMS1-204ENST00000492601 DPP7Q9UHL4 492 aa18.99■□□□□ 0.63
SGMS1-204ENST00000492601 SF3B1O75533 1304 aaKnown RBP eCLIP18.99■□□□□ 0.633e-6■■■■□ 20.7
SGMS1-204ENST00000492601 TGM5O43548 720 aa18.98■□□□□ 0.63
SGMS1-204ENST00000492601 VCPP55072 806 aaKnown RBP18.98■□□□□ 0.63
SGMS1-204ENST00000492601 ATP2C1P98194 919 aaPredicted RBP18.98■□□□□ 0.63
SGMS1-204ENST00000492601 RAD51AP2Q09MP3 1159 aa18.98■□□□□ 0.63
SGMS1-204ENST00000492601 FAM171A1Q5VUB5 890 aa18.98■□□□□ 0.63
SGMS1-204ENST00000492601 ELMSAN1Q6PJG2 1045 aa18.98■□□□□ 0.63
SGMS1-204ENST00000492601 OTOP3Q7RTS5 596 aa18.98■□□□□ 0.63
SGMS1-204ENST00000492601 CEP57Q86XR8 500 aa18.98■□□□□ 0.63
SGMS1-204ENST00000492601 UBALD2Q8IYN6 164 aa18.98■□□□□ 0.63
SGMS1-204ENST00000492601 PRSS33Q8NF86 280 aa18.98■□□□□ 0.63
SGMS1-204ENST00000492601 CMASQ8NFW8 434 aaPredicted RBP18.98■□□□□ 0.63
SGMS1-204ENST00000492601 PLIN2Q99541 437 aa18.98■□□□□ 0.63
SGMS1-204ENST00000492601 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.98■□□□□ 0.63
SGMS1-204ENST00000492601 VWA3AA6NCI4 1184 aa18.97■□□□□ 0.63
SGMS1-204ENST00000492601 SFI1A8K8P3 1242 aa18.97■□□□□ 0.63
SGMS1-204ENST00000492601 DMP1Q13316 513 aaPredicted RBP18.97■□□□□ 0.63
SGMS1-204ENST00000492601 C1orf186Q6ZWK4 172 aa18.97■□□□□ 0.63
SGMS1-204ENST00000492601 ALYREFQ86V81 257 aaKnown RBP18.97■□□□□ 0.63
SGMS1-204ENST00000492601 SMG7Q92540 1137 aaKnown RBP18.97■□□□□ 0.63
SGMS1-204ENST00000492601 KMT5AQ9NQR1 393 aa18.97■□□□□ 0.63
SGMS1-204ENST00000492601 FNIP2Q9P278 1114 aa18.97■□□□□ 0.63
SGMS1-204ENST00000492601 SMC3Q9UQE7 1217 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms