RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 TCP11Q8WWU5 503 aa10.88□□□□□ -0.67
TNFRSF9-203ENST00000492571 LENG9Q96B70 501 aa10.88□□□□□ -0.67
TNFRSF9-203ENST00000492571 NELL2Q99435 816 aa10.88□□□□□ -0.67
TNFRSF9-203ENST00000492571 SH2D3AQ9BRG2 576 aa10.88□□□□□ -0.67
TNFRSF9-203ENST00000492571 TRIM6Q9C030 488 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF9-203ENST00000492571 RXFP1Q9HBX9 757 aa10.88□□□□□ -0.67
TNFRSF9-203ENST00000492571 FBXO4Q9UKT5 387 aa10.88□□□□□ -0.67
TNFRSF9-203ENST00000492571 PPME1Q9Y570 386 aa10.88□□□□□ -0.67
TNFRSF9-203ENST00000492571 NUMBLQ9Y6R0 609 aa10.88□□□□□ -0.67
TNFRSF9-203ENST00000492571 KANSL1LA0AUZ9 987 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 ANHXE9PGG2 379 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 MARCH6O60337 910 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 TADA2AO75478 443 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 PSMD10O75832 226 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 AXLP30530 894 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 RFC5P40937 340 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 MAGEA9P43362 315 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 STARD6P59095 220 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 DSG1Q02413 1049 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 LMNB2Q03252 620 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 PRKCQQ04759 706 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 COL9A3Q14050 684 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 UBXN2BQ14CS0 331 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 Q4G0T1 1027 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 LIN9Q5TKA1 542 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 NOTUMQ6P988 496 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 GPR65Q8IYL9 337 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 TRIM22Q8IYM9 498 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 TBCKQ8TEA7 893 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 PRPF31Q8WWY3 499 aaKnown RBP10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 CEP170P1Q96L14 293 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 IFT122Q9HBG6 1241 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 PRDM9Q9NQV7 894 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 FAM217BQ9NTX9 383 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 CDV3Q9UKY7 258 aaKnown RBP10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 PCDHGA2Q9Y5H1 932 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 EVPLQ92817 2033 aa10.87□□□□□ -0.67
TNFRSF9-203ENST00000492571 TMEM150BA6NC51 233 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 ARL5CA6NH57 179 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 FAM170BA6NMN3 283 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 TGM5O43548 720 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 XYLBO75191 536 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 QARSP47897 775 aaKnown RBP10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 AFF1P51825 1210 aaKnown RBP10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 GPC5P78333 572 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 CSTF1Q05048 431 aaKnown RBP10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 SNW1Q13573 536 aaKnown RBP10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 HTR4Q13639 388 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 PPP2R5DQ14738 602 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 TSGA10IPQ3SY00 556 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 SLC44A4Q53GD3 710 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 ZBTB41Q5SVQ8 909 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 BRICD5Q6PL45 260 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 RSPO2Q6UXX9 243 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 TAS1R1Q7RTX1 841 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 COLGALT2Q8IYK4 626 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 RNF149Q8NC42 400 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 FEZF2Q8TBJ5 459 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 ZNF707Q96C28 371 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 CCDC51Q96ER9 411 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 CNTNAP3BQ96NU0 1288 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 GAD1Q99259 594 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 SLC26A6Q9BXS9 759 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 RNF26Q9BY78 433 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 CNTNAP3Q9BZ76 1288 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 OSBPL6Q9BZF3 934 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 FOXQ1Q9C009 403 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 SH3GLB2Q9NR46 395 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 CHST7Q9NS84 486 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 DLGAP2Q9P1A6 1054 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 FNIP2Q9P278 1114 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 CDH7Q9ULB5 785 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 RAB23Q9ULC3 237 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 POLIQ9UNA4 740 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 MRPS17Q9Y2R5 130 aaKnown RBP10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 ZNF292O60281 2723 aa10.86□□□□□ -0.67
TNFRSF9-203ENST00000492571 B4GALT3O60512 393 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 ZMYND10O75800 440 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 P4HBP07237 508 aaKnown RBP10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 HNRNPA1P09651 372 aaKnown RBP eCLIP10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 HOXA11P31270 313 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 MLH1P40692 756 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 LAMTOR4Q0VGL1 99 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 TFDP1Q14186 410 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 MXD4Q14582 209 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 MLF2Q15773 248 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 PPM1LQ5SGD2 360 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 RNF19BQ6ZMZ0 732 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 ANO5Q75V66 913 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 GRASPQ7Z6J2 395 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 GLYCTKQ8IVS8 523 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 SUMF1Q8NBK3 374 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 BRF1Q92994 677 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 GJA10Q969M2 543 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 TMEM143Q96AN5 459 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 CEP89Q96ST8 783 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 APOL6Q9BWW8 343 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 MARCH5Q9NX47 278 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 ZSCAN32Q9NX65 697 aa10.85□□□□□ -0.67
TNFRSF9-203ENST00000492571 VPS54Q9P1Q0 977 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms