RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SH3GLB2Q9NR46 395 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 FNIP2Q9P278 1114 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 VAV3Q9UKW4 847 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 HES2Q9Y543 173 aa14.6□□□□□ -0.07
HDAC3-213ENST00000492506 ZMYND10O75800 440 aa14.59□□□□□ -0.07
HDAC3-213ENST00000492506 KRT37O76014 449 aa14.59□□□□□ -0.07
HDAC3-213ENST00000492506 MLH1P40692 756 aa14.59□□□□□ -0.07
HDAC3-213ENST00000492506 QARSP47897 775 aaKnown RBP14.59□□□□□ -0.07
HDAC3-213ENST00000492506 SCNN1GP51170 649 aa14.59□□□□□ -0.07
HDAC3-213ENST00000492506 NPY5RQ15761 445 aa14.59□□□□□ -0.07
HDAC3-213ENST00000492506 ZNF528Q3MIS6 628 aa14.59□□□□□ -0.07
HDAC3-213ENST00000492506 MOXD1Q6UVY6 613 aa14.59□□□□□ -0.07
HDAC3-213ENST00000492506 PARM1Q6UWI2 310 aa14.59□□□□□ -0.07
HDAC3-213ENST00000492506 GPR65Q8IYL9 337 aa14.59□□□□□ -0.07
HDAC3-213ENST00000492506 PSPC1Q8WXF1 523 aaKnown RBP14.59□□□□□ -0.07
HDAC3-213ENST00000492506 SLC7A3Q8WY07 619 aa14.59□□□□□ -0.07
HDAC3-213ENST00000492506 PCDHA4Q9UN74 947 aa14.59□□□□□ -0.07
HDAC3-213ENST00000492506 ZFP37Q9Y6Q3 630 aaPredicted RBP14.59□□□□□ -0.07
HDAC3-213ENST00000492506 MAP1BP46821 2468 aaKnown RBP14.59□□□□□ -0.07
HDAC3-213ENST00000492506 CHD8Q9HCK8 2581 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 SLC37A4O43826 429 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 TSPAN1O60635 241 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 MBD3O95983 291 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 RPL17P18621 184 aaKnown RBP14.58□□□□□ -0.08
HDAC3-213ENST00000492506 NLRP5P59047 1200 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 AKAP17AQ02040 695 aaKnown RBP14.58□□□□□ -0.08
HDAC3-213ENST00000492506 PPP2R5CQ13362 524 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 UVSSAQ2YD98 709 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 FUT10Q6P4F1 479 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 FERMT3Q86UX7 667 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 GLYCTKQ8IVS8 523 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 FAM184AQ8NB25 1140 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 RNF149Q8NC42 400 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 CEP170P1Q96L14 293 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 COLEC11Q9BWP8 271 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.58□□□□□ -0.08
HDAC3-213ENST00000492506 MTF2Q9Y483 593 aaPredicted RBP14.58□□□□□ -0.08
HDAC3-213ENST00000492506 PPME1Q9Y570 386 aa14.58□□□□□ -0.08
HDAC3-213ENST00000492506 KANSL1LA0AUZ9 987 aa14.57□□□□□ -0.08
HDAC3-213ENST00000492506 K7ELQ4 463 aaPredicted RBP14.57□□□□□ -0.08
HDAC3-213ENST00000492506 KINO60870 393 aaKnown RBP14.57□□□□□ -0.08
HDAC3-213ENST00000492506 FSHRP23945 695 aa14.57□□□□□ -0.08
HDAC3-213ENST00000492506 RFC5P40937 340 aa14.57□□□□□ -0.08
HDAC3-213ENST00000492506 EVCP57679 992 aa14.57□□□□□ -0.08
HDAC3-213ENST00000492506 SNW1Q13573 536 aaKnown RBP14.57□□□□□ -0.08
HDAC3-213ENST00000492506 USP41Q3LFD5 358 aa14.57□□□□□ -0.08
HDAC3-213ENST00000492506 BMP2KLQ5H9B9 411 aa14.57□□□□□ -0.08
HDAC3-213ENST00000492506 VARS2Q5ST30 1063 aaKnown RBP14.57□□□□□ -0.08
HDAC3-213ENST00000492506 SHDQ96IW2 340 aa14.57□□□□□ -0.08
HDAC3-213ENST00000492506 CPB2Q96IY4 423 aa14.57□□□□□ -0.08
HDAC3-213ENST00000492506 NCOA5Q9HCD5 579 aaKnown RBP14.57□□□□□ -0.08
HDAC3-213ENST00000492506 KCNMB3Q9NPA1 279 aa14.57□□□□□ -0.08
HDAC3-213ENST00000492506 BMP2KQ9NSY1 1161 aaPredicted RBP14.57□□□□□ -0.08
HDAC3-213ENST00000492506 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.57□□□□□ -0.08
HDAC3-213ENST00000492506 OGFRQ9NZT2 677 aa14.57□□□□□ -0.08
HDAC3-213ENST00000492506 DDX25Q9UHL0 483 aaKnown RBP14.57□□□□□ -0.08
HDAC3-213ENST00000492506 FBXW11Q9UKB1 542 aa14.57□□□□□ -0.08
HDAC3-213ENST00000492506 FBXO4Q9UKT5 387 aa14.57□□□□□ -0.08
HDAC3-213ENST00000492506 TRIP11Q15643 1979 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 CFAP47Q6ZTR5 3102 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 ZBTB39O15060 712 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 SPTLC1O15269 473 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 ASAP2O43150 1006 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 P4HBP07237 508 aaKnown RBP14.56□□□□□ -0.08
HDAC3-213ENST00000492506 PDIA3P30101 505 aaKnown RBP14.56□□□□□ -0.08
HDAC3-213ENST00000492506 AXLP30530 894 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 PTENP60484 403 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 NTHL1P78549 312 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 EMC2Q15006 297 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 PCBP1Q15365 356 aaKnown RBP eCLIP14.56□□□□□ -0.08
HDAC3-213ENST00000492506 AMHR2Q16671 573 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 RTP2Q5QGT7 225 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 DNTTIP2Q5QJE6 756 aaKnown RBP14.56□□□□□ -0.08
HDAC3-213ENST00000492506 NOTUMQ6P988 496 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 PRSS55Q6UWB4 352 aaPredicted RBP14.56□□□□□ -0.08
HDAC3-213ENST00000492506 GRASPQ7Z6J2 395 aaPredicted RBP14.56□□□□□ -0.08
HDAC3-213ENST00000492506 IFNLR1Q8IU57 520 aaPredicted RBP14.56□□□□□ -0.08
HDAC3-213ENST00000492506 EXOC8Q8IYI6 725 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 BLIDQ8IZY5 108 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 DAGLBQ8NCG7 672 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 RABGGTAQ92696 567 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 NELL1Q92832 810 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 FGF13Q92913 245 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 SYAP1Q96A49 352 aaPredicted RBP14.56□□□□□ -0.08
HDAC3-213ENST00000492506 CCDC51Q96ER9 411 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 BORCS6Q96GS4 357 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 CSRNP2Q9H175 543 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 NXF3Q9H4D5 531 aaKnown RBP14.56□□□□□ -0.08
HDAC3-213ENST00000492506 XPNPEP1Q9NQW7 623 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 ADAM28Q9UKQ2 775 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 CDH7Q9ULB5 785 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 GIT1Q9Y2X7 761 aa14.56□□□□□ -0.08
HDAC3-213ENST00000492506 LILRB5O75023 590 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 NR1I2O75469 434 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 ERLIN2O94905 339 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 BAG4O95429 457 aaKnown RBP14.55□□□□□ -0.08
HDAC3-213ENST00000492506 ARF4P18085 180 aaPredicted RBP14.55□□□□□ -0.08
HDAC3-213ENST00000492506 TGM1P22735 817 aa14.55□□□□□ -0.08
HDAC3-213ENST00000492506 YWHABP31946 246 aaKnown RBP14.55□□□□□ -0.08
HDAC3-213ENST00000492506 ATXN1P54253 815 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms