RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 TUSC3Q13454 348 aa16.94■□□□□ 0.3
MRPL55-231ENST00000492170 HSP90AA2PQ14568 343 aaPredicted RBP16.94■□□□□ 0.3
MRPL55-231ENST00000492170 PPP2R5AQ15172 486 aa16.94■□□□□ 0.3
MRPL55-231ENST00000492170 TTC38Q5R3I4 469 aa16.94■□□□□ 0.3
MRPL55-231ENST00000492170 PALB2Q86YC2 1186 aa16.94■□□□□ 0.3
MRPL55-231ENST00000492170 TMEM105Q8N8V8 129 aa16.94■□□□□ 0.3
MRPL55-231ENST00000492170 RIN2Q8WYP3 895 aaPredicted RBP16.94■□□□□ 0.3
MRPL55-231ENST00000492170 SMG7Q92540 1137 aaKnown RBP16.94■□□□□ 0.3
MRPL55-231ENST00000492170 B3GALT6Q96L58 329 aa16.94■□□□□ 0.3
MRPL55-231ENST00000492170 KIF2CQ99661 725 aa16.94■□□□□ 0.3
MRPL55-231ENST00000492170 PDZD7Q9H5P4 517 aa16.94■□□□□ 0.3
MRPL55-231ENST00000492170 ZDHHC7Q9NXF8 308 aa16.94■□□□□ 0.3
MRPL55-231ENST00000492170 IGSF9Q9P2J2 1179 aa16.94■□□□□ 0.3
MRPL55-231ENST00000492170 DUSP12Q9UNI6 340 aa16.94■□□□□ 0.3
MRPL55-231ENST00000492170 C2orf16Q68DN1 1984 aa16.94■□□□□ 0.3
MRPL55-231ENST00000492170 PLXNA3P51805 1871 aa16.93■□□□□ 0.3
MRPL55-231ENST00000492170 RFPL2O75678 378 aa16.93■□□□□ 0.3
MRPL55-231ENST00000492170 RECQL4O94761 1208 aa16.93■□□□□ 0.3
MRPL55-231ENST00000492170 LIG1P18858 919 aa16.93■□□□□ 0.3
MRPL55-231ENST00000492170 GBP2P32456 591 aaPredicted RBP16.93■□□□□ 0.3
MRPL55-231ENST00000492170 TRAPPC10P48553 1259 aa16.93■□□□□ 0.3
MRPL55-231ENST00000492170 GLYCTKQ8IVS8 523 aa16.93■□□□□ 0.3
MRPL55-231ENST00000492170 FAM184AQ8NB25 1140 aa16.93■□□□□ 0.3
MRPL55-231ENST00000492170 FBXO18Q8NFZ0 1043 aa16.93■□□□□ 0.3
MRPL55-231ENST00000492170 BSNDQ8WZ55 320 aa16.93■□□□□ 0.3
MRPL55-231ENST00000492170 RABGGTAQ92696 567 aa16.93■□□□□ 0.3
MRPL55-231ENST00000492170 KCNK12Q9HB15 430 aa16.93■□□□□ 0.3
MRPL55-231ENST00000492170 PIDD1Q9HB75 910 aa16.93■□□□□ 0.3
MRPL55-231ENST00000492170 SNTG2Q9NY99 539 aa16.93■□□□□ 0.3
MRPL55-231ENST00000492170 NOL7Q9UMY1 257 aaKnown RBP16.93■□□□□ 0.3
MRPL55-231ENST00000492170 USP34Q70CQ2 3546 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 CASTOR2A6NHX0 329 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 H0Y858 1186 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 ACKR2O00590 384 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 TGM5O43548 720 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 THP07101 528 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 SPATA31D3P0C874 917 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 CLCN5P51795 746 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 DCAF4L1Q3SXM0 396 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 SPATA31D4Q6ZUB0 917 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 NOSTRINQ8IVI9 506 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 IFT74Q96LB3 600 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 ZSCAN31Q96LW9 406 aaPredicted RBP16.92■□□□□ 0.3
MRPL55-231ENST00000492170 CCDC113Q9H0I3 377 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 SH2B1Q9NRF2 756 aaPredicted RBP16.92■□□□□ 0.3
MRPL55-231ENST00000492170 CACNG4Q9UBN1 327 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 DAXXQ9UER7 740 aaPredicted RBP16.92■□□□□ 0.3
MRPL55-231ENST00000492170 FBXL21Q9UKT6 434 aa16.92■□□□□ 0.3
MRPL55-231ENST00000492170 TTLL13PA6NNM8 815 aa16.91■□□□□ 0.3
MRPL55-231ENST00000492170 PTGESO14684 152 aa16.91■□□□□ 0.3
MRPL55-231ENST00000492170 N4BP1O75113 896 aaKnown RBP16.91■□□□□ 0.3
MRPL55-231ENST00000492170 PAPLNO95428 1278 aa16.91■□□□□ 0.3
MRPL55-231ENST00000492170 RPL17P18621 184 aaKnown RBP16.91■□□□□ 0.3
MRPL55-231ENST00000492170 CCT6AP40227 531 aaKnown RBP16.91■□□□□ 0.3
MRPL55-231ENST00000492170 FXR2P51116 673 aaKnown RBP eCLIP16.91■□□□□ 0.3
MRPL55-231ENST00000492170 EFNA5P52803 228 aa16.91■□□□□ 0.3
MRPL55-231ENST00000492170 ELAVL2Q12926 359 aaKnown RBP16.91■□□□□ 0.3
MRPL55-231ENST00000492170 RTP2Q5QGT7 225 aa16.91■□□□□ 0.3
MRPL55-231ENST00000492170 FLCNQ8NFG4 579 aa16.91■□□□□ 0.3
MRPL55-231ENST00000492170 HASPINQ8TF76 798 aa16.91■□□□□ 0.3
MRPL55-231ENST00000492170 KIFAP3Q92845 792 aa16.91■□□□□ 0.3
MRPL55-231ENST00000492170 ZNF707Q96C28 371 aaPredicted RBP16.91■□□□□ 0.3
MRPL55-231ENST00000492170 PAAF1Q9BRP4 392 aa16.91■□□□□ 0.3
MRPL55-231ENST00000492170 TTPALQ9BTX7 342 aa16.91■□□□□ 0.3
MRPL55-231ENST00000492170 NT5C3AQ9H0P0 336 aa16.91■□□□□ 0.3
MRPL55-231ENST00000492170 EPS15L1Q9UBC2 864 aa16.91■□□□□ 0.3
MRPL55-231ENST00000492170 STK24Q9Y6E0 443 aa16.91■□□□□ 0.3
MRPL55-231ENST00000492170 ST18O60284 1047 aa16.9■□□□□ 0.3
MRPL55-231ENST00000492170 GFRA3O60609 400 aa16.9■□□□□ 0.3
MRPL55-231ENST00000492170 KIF4AO95239 1232 aa16.9■□□□□ 0.3
MRPL55-231ENST00000492170 FAM171A1Q5VUB5 890 aa16.9■□□□□ 0.3
MRPL55-231ENST00000492170 CWF19L1Q69YN2 538 aaKnown RBP16.9■□□□□ 0.3
MRPL55-231ENST00000492170 LILRA6Q6PI73 481 aa16.9■□□□□ 0.3
MRPL55-231ENST00000492170 PRSS55Q6UWB4 352 aaPredicted RBP16.9■□□□□ 0.3
MRPL55-231ENST00000492170 APBB1IPQ7Z5R6 666 aaPredicted RBP16.9■□□□□ 0.3
MRPL55-231ENST00000492170 PIK3R5Q8WYR1 880 aa16.9■□□□□ 0.3
MRPL55-231ENST00000492170 NXPE3Q969Y0 559 aa16.9■□□□□ 0.3
MRPL55-231ENST00000492170 MYADMQ96S97 322 aa16.9■□□□□ 0.3
MRPL55-231ENST00000492170 KIFC3Q9BVG8 833 aa16.9■□□□□ 0.3
MRPL55-231ENST00000492170 RAB34Q9BZG1 259 aa16.9■□□□□ 0.3
MRPL55-231ENST00000492170 PRKD2Q9BZL6 878 aa16.9■□□□□ 0.3
MRPL55-231ENST00000492170 BHMT2Q9H2M3 363 aa16.9■□□□□ 0.3
MRPL55-231ENST00000492170 LRWD1Q9UFC0 647 aa16.9■□□□□ 0.3
MRPL55-231ENST00000492170 ZMYND10O75800 440 aa16.89■□□□□ 0.29
MRPL55-231ENST00000492170 PSMD5Q16401 504 aa16.89■□□□□ 0.29
MRPL55-231ENST00000492170 LIN9Q5TKA1 542 aa16.89■□□□□ 0.29
MRPL55-231ENST00000492170 EEF1DP3Q658K8 133 aa16.89■□□□□ 0.29
MRPL55-231ENST00000492170 PDXDC1Q6P996 788 aa16.89■□□□□ 0.29
MRPL55-231ENST00000492170 GET4Q7L5D6 327 aaPredicted RBP16.89■□□□□ 0.29
MRPL55-231ENST00000492170 CEP57Q86XR8 500 aa16.89■□□□□ 0.29
MRPL55-231ENST00000492170 SIX5Q8N196 739 aa16.89■□□□□ 0.29
MRPL55-231ENST00000492170 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.89■□□□□ 0.29
MRPL55-231ENST00000492170 FBXW11Q9UKB1 542 aa16.89■□□□□ 0.29
MRPL55-231ENST00000492170 KIAA1024Q9UPX6 916 aa16.89■□□□□ 0.29
MRPL55-231ENST00000492170 USP20Q9Y2K6 914 aa16.89■□□□□ 0.29
MRPL55-231ENST00000492170 GDAQ9Y2T3 454 aa16.89■□□□□ 0.29
MRPL55-231ENST00000492170 NARSO43776 548 aaKnown RBP16.88■□□□□ 0.29
MRPL55-231ENST00000492170 EDN1P05305 212 aa16.88■□□□□ 0.29
MRPL55-231ENST00000492170 AOC1P19801 751 aa16.88■□□□□ 0.29
MRPL55-231ENST00000492170 NBR1Q14596 966 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms