RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 ZNF623O75123 536 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 OFD1O75665 1012 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 STBD1O95210 358 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 SLC11A1P49279 550 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 TSGA10IPQ3SY00 556 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 TWF2Q6IBS0 349 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 WDR5BQ86VZ2 330 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 ZNF280BQ86YH2 543 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 SPEM1Q8N4L4 309 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 ST13P5Q8NFI4 369 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 SLC5A5Q92911 643 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 GJA10Q969M2 543 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 RIT2Q99578 217 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 FDXACB1Q9BRP7 624 aaPredicted RBP13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 NIFKQ9BYG3 293 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 PRKD2Q9BZL6 878 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 SSX2IPQ9Y2D8 614 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 INPP5FQ9Y2H2 1132 aa13.13□□□□□ -0.31
CACNA1C-228ENST00000492150 ZNF462Q96JM2 2506 aa13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 C4orf47A7E2U8 309 aa13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 PRPF3O43395 683 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 CHMP2AO43633 222 aa13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 FSHRP23945 695 aa13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 SFNP31947 248 aa13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 MPLP40238 635 aa13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 CDC42EP1Q00587 391 aa13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 MTERF2Q49AM1 385 aa13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 GLB1LQ6UWU2 654 aa13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 CCDC12Q8WUD4 166 aaPredicted RBP13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 YTHDC1Q96MU7 727 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 UBL7Q96S82 380 aaPredicted RBP13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 SH2D3AQ9BRG2 576 aa13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 GBP3Q9H0R5 595 aa13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 HEBP1Q9NRV9 189 aa13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 FAM105AQ9NUU6 356 aa13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 PIN4Q9Y237 131 aaKnown RBP13.12□□□□□ -0.31
CACNA1C-228ENST00000492150 APC2O95996 2303 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 ASCC3Q8N3C0 2202 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 GAS7O60861 476 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 PSMD10O75832 226 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 DDHD2O94830 711 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 SKIP12755 728 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 SFPQP23246 707 aaKnown RBP eCLIP13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 GNA11P29992 359 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 AFF1P51825 1210 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 JAK3P52333 1124 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 RNASELQ05823 741 aaKnown RBP13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 XKR3Q5GH77 459 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 LRCH2Q5VUJ6 765 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 KIAA1211LQ6NV74 962 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 B3GNT9Q6UX72 402 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 CACNA2D4Q7Z3S7 1137 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 ZNF605Q86T29 641 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 ZNF410Q86VK4 478 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 CCDC136Q96JN2 1154 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 RPS6KC1Q96S38 1066 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 TEKT3Q9BXF9 490 aa13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 SUCLA2Q9P2R7 463 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 SEPT9Q9UHD8 586 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 NAP1L2Q9ULW6 460 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-228ENST00000492150 CCDC196A0A1B0GTZ2 297 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 H0Y626 953 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 TEX28O15482 410 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 ARHGAP6O43182 974 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 MAFO75444 373 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 TRIM16O95361 564 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 SEC24BO95487 1268 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 PRB1P04280 392 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 SSBP05455 408 aaKnown RBP eCLIP13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 CPA1P15085 419 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 DNM2P50570 870 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 RAB27AP51159 221 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 USP11P51784 963 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 GAS6Q14393 721 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 AGMOQ6ZNB7 445 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 CATSPER4Q7RTX7 472 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 MIER3Q7Z3K6 550 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 MRPL10Q7Z7H8 261 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 RHPN2Q8IUC4 686 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 KSR1Q8IVT5 923 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 RDM1Q8NG50 284 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 BICD2Q8TD16 824 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 FGF13Q92913 245 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 LRIG1Q96JA1 1093 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 INO80BQ9C086 356 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 LMAN1LQ9HAT1 526 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 RXFP1Q9HBX9 757 aa13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 NDRG2Q9UN36 371 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-228ENST00000492150 J3QKU1 62 aa13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 ECI2O75521 394 aa13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 URODP06132 367 aa13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 CHRNB1P11230 501 aa13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 FGD1P98174 961 aa13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 NTRK3Q16288 839 aa13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 LSM14AQ8ND56 463 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 GAB3Q8WWW8 586 aa13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 SLC39A7Q92504 469 aa13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 ZC3H10Q96K80 434 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-228ENST00000492150 MKNK1Q9BUB5 465 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms