RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 TAS1R3Q7RTX0 852 aa29.78■■■□□ 2.36
SH3GL3-204ENST00000492099 TAS1R1Q7RTX1 841 aa29.78■■■□□ 2.36
SH3GL3-204ENST00000492099 RASSF8Q8NHQ8 419 aa29.78■■■□□ 2.36
SH3GL3-204ENST00000492099 SNX21Q969T3 373 aa29.78■■■□□ 2.36
SH3GL3-204ENST00000492099 ADAM7Q9H2U9 754 aa29.78■■■□□ 2.36
SH3GL3-204ENST00000492099 ADAM28Q9UKQ2 775 aa29.78■■■□□ 2.36
SH3GL3-204ENST00000492099 CLIC4Q9Y696 253 aa29.78■■■□□ 2.36
SH3GL3-204ENST00000492099 LOC730098B7Z3J9 87 aa29.77■■■□□ 2.36
SH3GL3-204ENST00000492099 DCXO43602 365 aa29.77■■■□□ 2.36
SH3GL3-204ENST00000492099 GLUD2P49448 558 aa29.77■■■□□ 2.36
SH3GL3-204ENST00000492099 STRN3Q13033 797 aa29.77■■■□□ 2.36
SH3GL3-204ENST00000492099 KIAA1841Q6NSI8 718 aa29.77■■■□□ 2.36
SH3GL3-204ENST00000492099 PTPRHQ9HD43 1115 aa29.77■■■□□ 2.36
SH3GL3-204ENST00000492099 FOXD4L1Q9NU39 408 aa29.77■■■□□ 2.36
SH3GL3-204ENST00000492099 LARSQ9P2J5 1176 aaKnown RBP29.77■■■□□ 2.36
SH3GL3-204ENST00000492099 C5orf42Q9H799 3197 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 F8W810 466 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 C2CD2LO14523 706 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 GPR37L1O60883 481 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 TADA2AO75478 443 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 EPCAMP16422 314 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 DSG1Q02413 1049 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 HSP90AA2PQ14568 343 aaPredicted RBP29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 PTPAQ15257 358 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 ZNF568Q3ZCX4 644 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 ARSHQ5FYA8 562 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 TMEM31Q5JXX7 168 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 KIAA0319Q5VV43 1072 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 FUT10Q6P4F1 479 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 GPR65Q8IYL9 337 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 TMEM161BQ8NDZ6 487 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 NECTIN4Q96NY8 510 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 TARS2Q9BW92 718 aaKnown RBP29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 CCSER1Q9C0I3 900 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 ZSCAN16Q9H4T2 348 aaPredicted RBP29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 CHST7Q9NS84 486 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 ODF2LQ9ULJ1 636 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 MTMR6Q9Y217 621 aa29.76■■■□□ 2.35
SH3GL3-204ENST00000492099 H0YCG3 227 aa29.75■■■□□ 2.35
SH3GL3-204ENST00000492099 PLCG1P19174 1290 aa29.75■■■□□ 2.35
SH3GL3-204ENST00000492099 GRM5P41594 1212 aa29.75■■■□□ 2.35
SH3GL3-204ENST00000492099 CLCN4P51793 760 aa29.75■■■□□ 2.35
SH3GL3-204ENST00000492099 KARSQ15046 597 aaKnown RBP29.75■■■□□ 2.35
SH3GL3-204ENST00000492099 USP41Q3LFD5 358 aa29.75■■■□□ 2.35
SH3GL3-204ENST00000492099 RNF135Q8IUD6 432 aa29.75■■■□□ 2.35
SH3GL3-204ENST00000492099 TCHPQ9BT92 498 aa29.75■■■□□ 2.35
SH3GL3-204ENST00000492099 CCDC94Q9BW85 323 aaPredicted RBP29.75■■■□□ 2.35
SH3GL3-204ENST00000492099 GPR62Q9BZJ7 368 aa29.75■■■□□ 2.35
SH3GL3-204ENST00000492099 CDT1Q9H211 546 aa29.75■■■□□ 2.35
SH3GL3-204ENST00000492099 BLOC1S4Q9NUP1 217 aa29.75■■■□□ 2.35
SH3GL3-204ENST00000492099 STX6O43752 255 aa29.74■■■□□ 2.35
SH3GL3-204ENST00000492099 ADH1AP07327 375 aa29.74■■■□□ 2.35
SH3GL3-204ENST00000492099 MCF2P10911 925 aa29.74■■■□□ 2.35
SH3GL3-204ENST00000492099 YARSP54577 528 aaKnown RBP29.74■■■□□ 2.35
SH3GL3-204ENST00000492099 GPBP1Q86WP2 473 aa29.74■■■□□ 2.35
SH3GL3-204ENST00000492099 RPGRIP1Q96KN7 1286 aa29.74■■■□□ 2.35
SH3GL3-204ENST00000492099 FBXL18Q96ME1 805 aa29.74■■■□□ 2.35
SH3GL3-204ENST00000492099 RIPOR3Q96MK2 946 aa29.74■■■□□ 2.35
SH3GL3-204ENST00000492099 RXFP1Q9HBX9 757 aa29.74■■■□□ 2.35
SH3GL3-204ENST00000492099 TOPORSQ9NS56 1045 aaPredicted RBP29.74■■■□□ 2.35
SH3GL3-204ENST00000492099 SRPRBQ9Y5M8 271 aaKnown RBP29.74■■■□□ 2.35
SH3GL3-204ENST00000492099 GTF3C3Q9Y5Q9 886 aa29.74■■■□□ 2.35
SH3GL3-204ENST00000492099 SF3B1O75533 1304 aaKnown RBP eCLIP29.73■■■□□ 2.354e-7■■■■■ 87.5
SH3GL3-204ENST00000492099 NPHP3-ACAD11A0A0J9YXS1 232 aa29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 CASTOR2A6NHX0 329 aa29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 MAPTP10636 758 aaKnown RBP29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 PROZP22891 400 aa29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 MARCKSP29966 332 aaPredicted RBP29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 MTHFRP42898 656 aa29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 NAB2Q15742 525 aa29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 FAM173BQ6P4H8 233 aa29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 MPZL3Q6UWV2 235 aa29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 RABGGTAQ92696 567 aa29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 RAD54LQ92698 747 aa29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 PAAF1Q9BRP4 392 aa29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 CXCL16Q9H2A7 254 aa29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP29.73■■■□□ 2.35
SH3GL3-204ENST00000492099 BRD1O95696 1058 aa29.72■■■□□ 2.35
SH3GL3-204ENST00000492099 SCP2P22307 547 aa29.72■■■□□ 2.35
SH3GL3-204ENST00000492099 CACNB1Q02641 598 aaPredicted RBP29.72■■■□□ 2.35
SH3GL3-204ENST00000492099 DHX8Q14562 1220 aaKnown RBP29.72■■■□□ 2.35
SH3GL3-204ENST00000492099 MCM6Q14566 821 aa29.72■■■□□ 2.35
SH3GL3-204ENST00000492099 HERC4Q5GLZ8 1057 aaPredicted RBP29.72■■■□□ 2.35
SH3GL3-204ENST00000492099 RARS2Q5T160 578 aaKnown RBP29.72■■■□□ 2.35
SH3GL3-204ENST00000492099 LRRC15Q8TF66 581 aa29.72■■■□□ 2.35
SH3GL3-204ENST00000492099 REEP2Q9BRK0 252 aa29.72■■■□□ 2.35
SH3GL3-204ENST00000492099 LRFN3Q9BTN0 628 aa29.72■■■□□ 2.35
SH3GL3-204ENST00000492099 CACNG4Q9UBN1 327 aa29.72■■■□□ 2.35
SH3GL3-204ENST00000492099 DPP7Q9UHL4 492 aa29.72■■■□□ 2.35
SH3GL3-204ENST00000492099 FBXO2Q9UK22 296 aaPredicted RBP29.72■■■□□ 2.35
SH3GL3-204ENST00000492099 TEX28O15482 410 aa29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 TOM1L1O75674 476 aa29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 DDIT3P35638 169 aa29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 ATAT1Q5SQI0 421 aa29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 ZPBP2Q6X784 338 aa29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 ZBTB33Q86T24 672 aa29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 C12orf76Q8N812 135 aaPredicted RBP29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 CEP120Q8N960 986 aa29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 LARP4BQ92615 738 aaKnown RBP29.71■■■□□ 2.35
SH3GL3-204ENST00000492099 KCNN1Q92952 543 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms