RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CXCL16Q9H2A7 254 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 BHMT2Q9H2M3 363 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 PLEKHA4Q9H4M7 779 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 ARHGAP28Q9P2N2 729 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 LRWD1Q9UFC0 647 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 DPP7Q9UHL4 492 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 NOL7Q9UMY1 257 aaKnown RBP9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 KIAA1024Q9UPX6 916 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 PRG3Q9Y2Y8 225 aaPredicted RBP9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 NOTCH4Q99466 2003 aa9.25□□□□□ -0.93
SMARCB1-207ENST00000491967 MYH11P35749 1972 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 CITO14578 2027 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 TMEM189-UBE2V1I3L0A0 370 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 ABLIM1O14639 778 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 N4BP1O75113 896 aaKnown RBP9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 SSBP05455 408 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 PRKCBP05771 671 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 PROZP22891 400 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 AVPR2P30518 371 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 CCT6AP40227 531 aaKnown RBP9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 TCF15Q12870 199 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 MAPK7Q13164 816 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 MTMR3Q13615 1198 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 HSP90AA2PQ14568 343 aaPredicted RBP9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 USP41Q3LFD5 358 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 EEF1DP3Q658K8 133 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 MAEAQ7L5Y9 396 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 OTOP3Q7RTS5 596 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 TAS1R3Q7RTX0 852 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 TDRD5Q8NAT2 981 aaKnown RBP9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 FAM184AQ8NB25 1140 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 TMEM87AQ8NBN3 555 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 PRSS33Q8NF86 280 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 PIK3R5Q8WYR1 880 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 PPP1R10Q96QC0 940 aaKnown RBP9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 PAAF1Q9BRP4 392 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 TMEM134Q9H6X4 195 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 C17orf75Q9HAS0 396 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 WDR6Q9NNW5 1121 aaKnown RBP9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 KLK14Q9P0G3 267 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 PARP2Q9UGN5 583 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 LIMD1Q9UGP4 676 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 TNFSF13BQ9Y275 285 aa9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 RIF1Q5UIP0 2472 aaKnown RBP9.24□□□□□ -0.93
SMARCB1-207ENST00000491967 CCDC195A0A1B0GUA6 201 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 TGM5O43548 720 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 RECQL4O94761 1208 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 CD2BP2O95400 341 aaKnown RBP9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 GLUD1P00367 558 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 THP07101 528 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 POU2F2P09086 479 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 GUCY2CP25092 1073 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 NPTX2P47972 431 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 VCPP55072 806 aaKnown RBP9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 ATP2C1P98194 919 aaPredicted RBP9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 CREMQ03060 361 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 DCAF4L1Q3SXM0 396 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 RILPL1Q5EBL4 403 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 RTP2Q5QGT7 225 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 ARL6IP4Q66PJ3 421 aaKnown RBP9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 RINT1Q6NUQ1 792 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 RTL10Q7L3V2 364 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 KCNK18Q7Z418 384 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 DEPTORQ8TB45 409 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 LNX1Q8TBB1 728 aaPredicted RBP9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 TMX3Q96JJ7 454 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 B3GALT6Q96L58 329 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 ACO2Q99798 780 aaKnown RBP9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 CLSTN3Q9BQT9 956 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 KIFC3Q9BVG8 833 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 TIPINQ9BVW5 301 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 APOL6Q9BWW8 343 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 RAB34Q9BZG1 259 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 NT5C3AQ9H0P0 336 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 MAN1C1Q9NR34 630 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 TSHZ2Q9NRE2 1034 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 DDX19AQ9NUU7 478 aaKnown RBP9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 ZDHHC7Q9NXF8 308 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 SNTG2Q9NY99 539 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 EPS15L1Q9UBC2 864 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 DNM3Q9UQ16 869 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 USP20Q9Y2K6 914 aa9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 RBM19Q9Y4C8 960 aaKnown RBP9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 SF3B1O75533 1304 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 PDCD11Q14690 1871 aaKnown RBP9.23□□□□□ -0.93
SMARCB1-207ENST00000491967 PP2D1A8MPX8 630 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 ANHXE9PGG2 379 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 E9PMD0 336 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 K7ERI5 159 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 C2CD2LO14523 706 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 MEFVO15553 781 aaPredicted RBP9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 SLC26A4O43511 780 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 TADA2AO75478 443 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 RFPL2O75678 378 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 ZMYND10O75800 440 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 KIF4AO95239 1232 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 PDGFBP01127 241 aaPredicted RBP9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 ASGR2P07307 311 aa9.22□□□□□ -0.93
SMARCB1-207ENST00000491967 FGFR3P22607 806 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms