RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 FIBCD1Q8N539 461 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 KCTD17Q8N5Z5 321 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 MLKLQ8NB16 471 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 RAD54LQ92698 747 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 KIFAP3Q92845 792 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 CASD1Q96PB1 797 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 TRAIPQ9BWF2 469 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 EIF2AQ9BY44 585 aaKnown RBP10.28□□□□□ -0.76
BRCA1-219ENST00000491747 CCDC113Q9H0I3 377 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 FZD8Q9H461 694 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 ARFGAP3Q9NP61 516 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 FAM105AQ9NUU6 356 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 STXBP5LQ9Y2K9 1186 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 MRFAP1Q9Y605 127 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 TBKBP1A7MCY6 615 aa10.27□□□□□ -0.77
BRCA1-219ENST00000491747 PEX3P56589 373 aa10.27□□□□□ -0.77
BRCA1-219ENST00000491747 PPP2R3AQ06190 1150 aa10.27□□□□□ -0.77
BRCA1-219ENST00000491747 EPC2Q52LR7 807 aa10.27□□□□□ -0.77
BRCA1-219ENST00000491747 CC2D1AQ6P1N0 951 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-219ENST00000491747 LRRC55Q6ZSA7 311 aa10.27□□□□□ -0.77
BRCA1-219ENST00000491747 TMEM192Q8IY95 271 aa10.27□□□□□ -0.77
BRCA1-219ENST00000491747 CMTR2Q8IYT2 770 aaKnown RBP10.27□□□□□ -0.77
BRCA1-219ENST00000491747 PDILTQ8N807 584 aa10.27□□□□□ -0.77
BRCA1-219ENST00000491747 TRIML1Q8N9V2 468 aa10.27□□□□□ -0.77
BRCA1-219ENST00000491747 RNF169Q8NCN4 708 aa10.27□□□□□ -0.77
BRCA1-219ENST00000491747 GDPD5Q8WTR4 605 aa10.27□□□□□ -0.77
BRCA1-219ENST00000491747 RABGGTAQ92696 567 aa10.27□□□□□ -0.77
BRCA1-219ENST00000491747 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-219ENST00000491747 NFE2L3Q9Y4A8 694 aa10.27□□□□□ -0.77
BRCA1-219ENST00000491747 ERLIN2O94905 339 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 FOSL2P15408 326 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 NPTX2P47972 431 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 POSTNQ15063 836 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 TAS1R3Q7RTX0 852 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 GPBP1Q86WP2 473 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 TXLNBQ8N3L3 684 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 SMG8Q8ND04 991 aaKnown RBP10.26□□□□□ -0.77
BRCA1-219ENST00000491747 ENOX1Q8TC92 643 aaKnown RBP10.26□□□□□ -0.77
BRCA1-219ENST00000491747 CLP1Q92989 425 aaKnown RBP10.26□□□□□ -0.77
BRCA1-219ENST00000491747 INTS13Q9NVM9 706 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 PCDHB2Q9Y5E7 798 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 ZNF623O75123 536 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 EOMESO95936 686 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 GOLGA8FQ08AF8 430 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 GOLGA8DPQ0D2H9 430 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 GIT2Q14161 759 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 NT5DC1Q5TFE4 455 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 KANK3Q6NY19 840 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 PPP4R3CPQ6ZMV5 832 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 AGMOQ6ZNB7 445 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 TC2NQ8N9U0 490 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 RASSF8Q8NHQ8 419 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 DEPTORQ8TB45 409 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 HELQQ8TDG4 1101 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 LARP4BQ92615 738 aaKnown RBP10.26□□□□□ -0.77
BRCA1-219ENST00000491747 GOLGA1Q92805 767 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 SMARCE1Q969G3 411 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 CCDC34Q96HJ3 373 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 IFT74Q96LB3 600 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 WDR24Q96S15 920 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 REEP2Q9BRK0 252 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 UBXN6Q9BZV1 441 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 RNF39Q9H2S5 420 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 CWH43Q9H720 699 aa10.26□□□□□ -0.77
BRCA1-219ENST00000491747 TYW1Q9NV66 732 aaKnown RBP10.26□□□□□ -0.77
BRCA1-219ENST00000491747 TDRD15B5MCY1 1934 aaKnown RBP10.25□□□□□ -0.77
BRCA1-219ENST00000491747 A0A1B0GUA9 196 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 CCDC169A6NNP5 214 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 POLR3GO15318 223 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-219ENST00000491747 SEC31AO94979 1220 aaKnown RBP10.25□□□□□ -0.77
BRCA1-219ENST00000491747 CCDC175P0C221 793 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 ZNF18P17022 549 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 BMP6P22004 513 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 IGFBP4P22692 258 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 AXLP30530 894 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 BMPR1AP36894 532 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 AFF1P51825 1210 aaKnown RBP10.25□□□□□ -0.77
BRCA1-219ENST00000491747 PPP2R5AQ15172 486 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 PCBP1Q15365 356 aaKnown RBP eCLIP10.25□□□□□ -0.77
BRCA1-219ENST00000491747 FAM187BQ17R55 369 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 RRAGBQ5VZM2 374 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 RSRC2Q7L4I2 434 aaKnown RBP10.25□□□□□ -0.77
BRCA1-219ENST00000491747 MRPL10Q7Z7H8 261 aaKnown RBP10.25□□□□□ -0.77
BRCA1-219ENST00000491747 ZBTB8OSQ8IWT0 167 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 FBXO22Q8NEZ5 403 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 DRC1Q96MC2 740 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 GAS2L1Q99501 681 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-219ENST00000491747 PRMT7Q9NVM4 692 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-219ENST00000491747 MAN1B1Q9UKM7 699 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 HES2Q9Y543 173 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 CNTNAP2Q9UHC6 1331 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 SLC16A4O15374 487 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 PRKCBP05771 671 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 CTNNB1P35222 781 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 SMC1AQ14683 1233 aaKnown RBP10.25□□□□□ -0.77
BRCA1-219ENST00000491747 NOTUMQ6P988 496 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 TIPINQ9BVW5 301 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 TMEM117Q9H0C3 514 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 C2orf40Q9H1Z8 148 aa10.25□□□□□ -0.77
BRCA1-219ENST00000491747 PDZD7Q9H5P4 517 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms