RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 EPHB2P29323 1055 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 MRPS35P82673 323 aaKnown RBP13.64□□□□□ -0.23
SHOX2-205ENST00000490689 MAP7D1Q3KQU3 841 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 TMEM270Q6UE05 265 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 RGS9BPQ6ZS82 235 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 PAF1Q8N7H5 531 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 FAM20AQ96MK3 541 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 PWWP2AQ96N64 755 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 WDR11Q9BZH6 1224 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 IKZF4Q9H2S9 585 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 MAGED2Q9UNF1 606 aaPredicted RBP13.64□□□□□ -0.23
SHOX2-205ENST00000490689 NEU2Q9Y3R4 380 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 TLR3O15455 904 aaKnown RBP13.64□□□□□ -0.23
SHOX2-205ENST00000490689 RASSF9O75901 435 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 SGPL1O95470 568 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 EYA4O95677 639 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 BZW1Q7L1Q6 419 aaKnown RBP13.64□□□□□ -0.23
SHOX2-205ENST00000490689 ST13P4Q8IZP2 240 aaPredicted RBP13.64□□□□□ -0.23
SHOX2-205ENST00000490689 PPM1NQ8N819 430 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 PPP4R1Q8TF05 950 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 SPIRE2Q8WWL2 714 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 ACSF2Q96CM8 615 aaPredicted RBP13.64□□□□□ -0.23
SHOX2-205ENST00000490689 C3P01024 1663 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 CFLARO15519 480 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 RALAP11233 206 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 NOP14P78316 857 aaKnown RBP13.64□□□□□ -0.23
SHOX2-205ENST00000490689 GIT2Q14161 759 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 KIF22Q14807 665 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 NLRX1Q86UT6 975 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 SLC26A7Q8TE54 656 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 CCT6BQ92526 530 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 SERPINB12Q96P63 405 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 RXFP1Q9HBX9 757 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 NAALADL1Q9UQQ1 740 aa13.64□□□□□ -0.23
SHOX2-205ENST00000490689 F5H6K3 240 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 COPEO14579 308 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 GGPS1O95749 300 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 GH2P01242 217 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 BPIFB4P59827 614 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 CAV1Q03135 178 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 KLRC3Q07444 240 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 HADHQ16836 314 aaKnown RBP13.63□□□□□ -0.23
SHOX2-205ENST00000490689 MTDHQ86UE4 582 aaKnown RBP13.63□□□□□ -0.23
SHOX2-205ENST00000490689 PGM2Q96G03 612 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 LXNQ9BS40 222 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 PI4K2AQ9BTU6 479 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 NDE1Q9NXR1 346 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 XRN1Q8IZH2 1706 aaKnown RBP13.63□□□□□ -0.23
SHOX2-205ENST00000490689 LPXNO60711 386 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 CCNHP51946 323 aaPredicted RBP13.63□□□□□ -0.23
SHOX2-205ENST00000490689 PDE1BQ01064 536 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 XRCC4Q13426 336 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 THOC5Q13769 683 aaKnown RBP13.63□□□□□ -0.23
SHOX2-205ENST00000490689 SCARA5Q6ZMJ2 495 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 MIGA2Q7L4E1 593 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 RHPN2Q8IUC4 686 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 CHURC1Q8WUH1 139 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 SLC35C1Q96A29 364 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 THTPAQ9BU02 230 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.63□□□□□ -0.23
SHOX2-205ENST00000490689 PCSK1NQ9UHG2 260 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 FAF1Q9UNN5 650 aaPredicted RBP13.63□□□□□ -0.23
SHOX2-205ENST00000490689 MST1RQ04912 1400 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 SPECC1L-ADORA2AF8WAN1 911 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 LGR5O75473 907 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 FNTAP49354 379 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 AP3B2Q13367 1082 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 CNGA2Q16280 664 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 TMCO4Q5TGY1 634 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 SLC5A5Q92911 643 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 CEP170P1Q96L14 293 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 FAM213AQ9BRX8 229 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 CCPG1Q9ULG6 757 aa13.63□□□□□ -0.23
SHOX2-205ENST00000490689 MRPL11Q9Y3B7 192 aaKnown RBP13.63□□□□□ -0.23
SHOX2-205ENST00000490689 B2RBV5 119 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 PPFIA2O75334 1257 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 PIAS1O75925 651 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 RARAP10276 462 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 AUHQ13825 339 aaKnown RBP13.62□□□□□ -0.23
SHOX2-205ENST00000490689 DARS2Q6PI48 645 aaKnown RBP13.62□□□□□ -0.23
SHOX2-205ENST00000490689 CLEC4GQ6UXB4 293 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 NLRP9Q7RTR0 991 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 CCDC125Q86Z20 511 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 DEPTORQ8TB45 409 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 ATP2A3Q93084 1043 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 FERMT1Q9BQL6 677 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 CENPKQ9BS16 269 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 ERVK-5Q9HDB9 667 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 GGA2Q9UJY4 613 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 SLC16A3O15427 465 aaKnown RBP13.62□□□□□ -0.23
SHOX2-205ENST00000490689 CREB3O43889 395 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 RNF8O76064 485 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 TJP3O95049 919 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 KRT4P19013 534 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 EIF2AK2P19525 551 aaKnown RBP13.62□□□□□ -0.23
SHOX2-205ENST00000490689 RPA1P27694 616 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 NR1H3Q13133 447 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 KRT81Q14533 505 aa13.62□□□□□ -0.23
SHOX2-205ENST00000490689 TAF1BQ53T94 588 aaPredicted RBP13.62□□□□□ -0.23
SHOX2-205ENST00000490689 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms