RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 SOX5P35711 763 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 YWHAGP61981 247 aaKnown RBP eCLIP15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 ARHGEF18Q6ZSZ5 1173 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 OTOP1Q7RTM1 612 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 MTMR14Q8NCE2 650 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 SPON2Q9BUD6 331 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 AAASQ9NRG9 546 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 TMEM39AQ9NV64 488 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 VPS18Q9P253 973 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 APEX2Q9UBZ4 518 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 A0A1W2PQC6 194 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 PSMC6P62333 389 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 BASP1P80723 227 aaKnown RBP15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 ATP11AP98196 1134 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 TFDP2Q14188 446 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 CCDC144BQ3MJ40 725 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 BZW1Q7L1Q6 419 aaKnown RBP15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 CCDC110Q8TBZ0 833 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 COPS5Q92905 334 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 HPDLQ96IR7 371 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 YME1L1Q96TA2 773 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 EIF3CLB5ME19 914 aaKnown RBP15.33■□□□□ 0.05
ARHGEF39-205ENST00000490638 SRGAP2BP0DMP2 458 aa15.33■□□□□ 0.05
ARHGEF39-205ENST00000490638 SAT1P21673 171 aa15.33■□□□□ 0.05
ARHGEF39-205ENST00000490638 SOX10P56693 466 aa15.33■□□□□ 0.05
ARHGEF39-205ENST00000490638 GFPT1Q06210 699 aaPredicted RBP15.33■□□□□ 0.05
ARHGEF39-205ENST00000490638 MTMR3Q13615 1198 aa15.33■□□□□ 0.05
ARHGEF39-205ENST00000490638 P3H4Q92791 437 aa15.33■□□□□ 0.05
ARHGEF39-205ENST00000490638 ZNF512Q96ME7 567 aaPredicted RBP15.33■□□□□ 0.05
ARHGEF39-205ENST00000490638 EIF3CQ99613 913 aaKnown RBP15.33■□□□□ 0.05
ARHGEF39-205ENST00000490638 FAM49BQ9NUQ9 324 aa15.33■□□□□ 0.05
ARHGEF39-205ENST00000490638 PEAK1Q9H792 1746 aa15.33■□□□□ 0.05
ARHGEF39-205ENST00000490638 APOEP02649 317 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 KRT10P13645 584 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 LCP1P13796 627 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 HSPA6P17066 643 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 SNRPFP62306 86 aaKnown RBP15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 NME3Q13232 169 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 DCAF4L1Q3SXM0 396 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 MGAT5BQ3V5L5 792 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 SV2CQ496J9 727 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 NT5C1AQ9BXI3 368 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 ANAPC5Q9UJX4 755 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 UBA1P22314 1058 aaKnown RBP15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 PHBP35232 272 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 RGS7P49802 495 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 MFSD10Q14728 455 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 ERCC6LQ2NKX8 1250 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 SPRYD7Q5W111 196 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 CC2D1AQ6P1N0 951 aaPredicted RBP15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 NFRKBQ6P4R8 1299 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 SRGAP1Q7Z6B7 1085 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 SKA2Q8WVK7 121 aaPredicted RBP15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 C18orf8Q96DM3 657 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 SENP7Q9BQF6 1050 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 SENP6Q9GZR1 1112 aaPredicted RBP15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 LMCD1Q9NZU5 365 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 AFG3L2Q9Y4W6 797 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 AKAP12Q02952 1782 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 ANKRD26Q9UPS8 1709 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 RALAP11233 206 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 PSEN2P49810 448 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 GIT2Q14161 759 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 FAM110CQ1W6H9 321 aa15.33■□□□□ 0.04
ARHGEF39-205ENST00000490638 ITGB3P05106 788 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 SLC9A1P19634 815 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 TAF6P49848 677 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 EFCAB13Q8IY85 973 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 RBBP8NLQ8NC74 664 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 FAM76AQ8TAV0 307 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 SEPT5Q99719 369 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 COLEC11Q9BWP8 271 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 TMEM8AQ9HCN3 771 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 KBTBD4Q9NVX7 518 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 HEY1Q9Y5J3 304 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 TMEM150BA6NC51 233 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 CREB3O43889 395 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 VIMP08670 466 aaKnown RBP15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 UCHL3P15374 230 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 CBWD2Q8IUF1 395 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 PI4K2AQ9BTU6 479 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 IPO11Q9UI26 975 aaKnown RBP15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 PIK3R2O00459 728 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 PRKAR2AP13861 404 aaKnown RBP15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 NNMTP40261 264 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 CDK17Q00537 523 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 LAMTOR4Q0VGL1 99 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 PLCB4Q15147 1175 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 GJC2Q5T442 439 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 HHATQ5VTY9 493 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 DCP1BQ8IZD4 617 aaKnown RBP15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 ENGASEQ8NFI3 743 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 CBWD1Q9BRT8 395 aa15.32■□□□□ 0.04
ARHGEF39-205ENST00000490638 KLRG2A4D1S0 409 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 SLITRK3O94933 977 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 STILQ15468 1287 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 MPZL3Q6UWV2 235 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 BTNL9Q6UXG8 535 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 DLK2Q6UY11 383 aa15.31■□□□□ 0.04
ARHGEF39-205ENST00000490638 FBF1Q8TES7 1133 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms