RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 MAGEC2Q9UBF1 373 aaPredicted RBP17.14■□□□□ 0.33
PCCB-218ENST00000490504 COL4A3BPQ9Y5P4 624 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 MUC3AQ02505 3323 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 TBCAO75347 108 aaKnown RBP17.14■□□□□ 0.33
PCCB-218ENST00000490504 LYPLA2O95372 231 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 CLCN1P35523 988 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 COPB1P53618 953 aaKnown RBP17.14■□□□□ 0.33
PCCB-218ENST00000490504 LRRC63Q05C16 580 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 EMC2Q15006 297 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 C1orf186Q6ZWK4 172 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 IRF2BP1Q8IU81 584 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 RNF169Q8NCN4 708 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 CASD1Q96PB1 797 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 TSG101Q99816 390 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 IFT122Q9HBG6 1241 aa17.14■□□□□ 0.33
PCCB-218ENST00000490504 RTN4Q9NQC3 1192 aaKnown RBP17.14■□□□□ 0.33
PCCB-218ENST00000490504 A0A0U1RQF3 1178 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 SRGAP2CP0DJJ0 459 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 GAP43P17677 238 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 KCNA5P22460 613 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
PCCB-218ENST00000490504 LAMTOR4Q0VGL1 99 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 LRMPQ12912 555 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 SPOUT1Q5T280 376 aaKnown RBP17.13■□□□□ 0.33
PCCB-218ENST00000490504 SPECC1LQ69YQ0 1117 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 LRRC55Q6ZSA7 311 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 EXOC8Q8IYI6 725 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 INO80BQ9C086 356 aaPredicted RBP17.13■□□□□ 0.33
PCCB-218ENST00000490504 TMEM117Q9H0C3 514 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 ZHX3Q9H4I2 956 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 CWH43Q9H720 699 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 XPNPEP1Q9NQW7 623 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 CHST12Q9NRB3 414 aa17.13■□□□□ 0.33
PCCB-218ENST00000490504 ARHGEF35A5YM69 484 aa17.12■□□□□ 0.33
PCCB-218ENST00000490504 TNFRSF10AO00220 468 aa17.12■□□□□ 0.33
PCCB-218ENST00000490504 FGFR1OPO95684 399 aaKnown RBP17.12■□□□□ 0.33
PCCB-218ENST00000490504 ATF7P17544 494 aaPredicted RBP17.12■□□□□ 0.33
PCCB-218ENST00000490504 ARID5BQ14865 1188 aa17.12■□□□□ 0.33
PCCB-218ENST00000490504 CLLU1OSQ5K130 101 aa17.12■□□□□ 0.33
PCCB-218ENST00000490504 CATSPER4Q7RTX7 472 aa17.12■□□□□ 0.33
PCCB-218ENST00000490504 ZNF598Q86UK7 904 aaKnown RBP17.12■□□□□ 0.33
PCCB-218ENST00000490504 GLIS3Q8NEA6 775 aa17.12■□□□□ 0.33
PCCB-218ENST00000490504 POF1BQ8WVV4 589 aa17.12■□□□□ 0.33
PCCB-218ENST00000490504 PSPC1Q8WXF1 523 aaKnown RBP17.12■□□□□ 0.33
PCCB-218ENST00000490504 TAB2Q9NYJ8 693 aa17.12■□□□□ 0.33
PCCB-218ENST00000490504 TBC1D7Q9P0N9 293 aa17.12■□□□□ 0.33
PCCB-218ENST00000490504 DBR1Q9UK59 544 aaKnown RBP17.12■□□□□ 0.33
PCCB-218ENST00000490504 PYCARDQ9ULZ3 195 aa17.12■□□□□ 0.33
PCCB-218ENST00000490504 ARID2Q68CP9 1835 aa17.12■□□□□ 0.33
PCCB-218ENST00000490504 N4BP3O15049 544 aa17.11■□□□□ 0.33
PCCB-218ENST00000490504 FAM13AO94988 1023 aa17.11■□□□□ 0.33
PCCB-218ENST00000490504 IRS1P35568 1242 aa17.11■□□□□ 0.33
PCCB-218ENST00000490504 HYAL1Q12794 435 aa17.11■□□□□ 0.33
PCCB-218ENST00000490504 TBX2Q13207 712 aaPredicted RBP17.11■□□□□ 0.33
PCCB-218ENST00000490504 COL19A1Q14993 1142 aa17.11■□□□□ 0.33
PCCB-218ENST00000490504 ARMCX5Q6P1M9 558 aa17.11■□□□□ 0.33
PCCB-218ENST00000490504 SFR1Q86XK3 245 aa17.11■□□□□ 0.33
PCCB-218ENST00000490504 FGFBP2Q9BYJ0 223 aa17.11■□□□□ 0.33
PCCB-218ENST00000490504 MINDY3Q9H8M7 445 aa17.11■□□□□ 0.33
PCCB-218ENST00000490504 ANKEF1Q9NU02 776 aa17.11■□□□□ 0.33
PCCB-218ENST00000490504 PIN4Q9Y237 131 aaKnown RBP17.11■□□□□ 0.33
PCCB-218ENST00000490504 PCDHB12Q9Y5F1 795 aa17.11■□□□□ 0.33
PCCB-218ENST00000490504 TEX33O43247 280 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 HOXA2O43364 376 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 EOMESO95936 686 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 PBX1P40424 430 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 PHKA2P46019 1235 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 LEXMQ3ZCV2 418 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 EP400NLQ6ZTU2 488 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 COLGALT1Q8NBJ5 622 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.1■□□□□ 0.33
PCCB-218ENST00000490504 KIAA1524Q8TCG1 905 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 SCFD1Q8WVM8 642 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 TCP11Q8WWU5 503 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 PABPC5Q96DU9 382 aaKnown RBP17.1■□□□□ 0.33
PCCB-218ENST00000490504 CNOT6LQ96LI5 555 aaKnown RBP17.1■□□□□ 0.33
PCCB-218ENST00000490504 VPS16Q9H269 839 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 AAASQ9NRG9 546 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 H3BQ06 376 aaPredicted RBP17.1■□□□□ 0.33
PCCB-218ENST00000490504 GAS2O43903 313 aaKnown RBP17.1■□□□□ 0.33
PCCB-218ENST00000490504 TPM2P07951 284 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 GUCY2CP25092 1073 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 GTF2F1P35269 517 aaKnown RBP eCLIP17.1■□□□□ 0.33
PCCB-218ENST00000490504 RARRES1P49788 294 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 ZCWPW2Q504Y3 356 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 TWF2Q6IBS0 349 aaKnown RBP17.1■□□□□ 0.33
PCCB-218ENST00000490504 SRGAP1Q7Z6B7 1085 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 CREBRFQ8IUR6 639 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 ABI1Q8IZP0 508 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 RNF149Q8NC42 400 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 HELQQ8TDG4 1101 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 TRAIPQ9BWF2 469 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 PARVGQ9HBI0 331 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 OLFML3Q9NRN5 406 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 CLDND1Q9NY35 253 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 SEL1LQ9UBV2 794 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 PCDHGC5Q9Y5F6 944 aa17.1■□□□□ 0.33
PCCB-218ENST00000490504 MYO7AQ13402 2215 aa17.09■□□□□ 0.33
PCCB-218ENST00000490504 ITIH6Q6UXX5 1313 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms