RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 FOXS1O43638 330 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 FRAT2O75474 233 aaPredicted RBP5.35□□□□□ -1.55
RBM39-235ENST00000490354 IDH1O75874 414 aaKnown RBP5.35□□□□□ -1.55
RBM39-235ENST00000490354 CHGBP05060 677 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 MCCP23508 829 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 VAMP1P23763 118 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 HSPA4P34932 840 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 HDLBPQ00341 1268 aaKnown RBP5.35□□□□□ -1.55
RBM39-235ENST00000490354 GRIN1Q05586 938 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 NECTIN1Q15223 517 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 DALRD3Q5D0E6 543 aaKnown RBP5.35□□□□□ -1.55
RBM39-235ENST00000490354 SOGA3Q5TF21 947 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 SPTY2D1Q68D10 685 aaPredicted RBP5.35□□□□□ -1.55
RBM39-235ENST00000490354 VASNQ6EMK4 673 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 OLFM4Q6UX06 510 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 RALYLQ86SE5 291 aaKnown RBP5.35□□□□□ -1.55
RBM39-235ENST00000490354 ZNF589Q86UQ0 364 aaPredicted RBP5.35□□□□□ -1.55
RBM39-235ENST00000490354 DTX3Q8N9I9 347 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 SUPT20HQ8NEM7 779 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 TBC1D22AQ8WUA7 517 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 OSBP2Q969R2 916 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 C1orf159Q96HA4 380 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 CCDC140Q96MF4 163 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 SEC62Q99442 399 aaKnown RBP5.35□□□□□ -1.55
RBM39-235ENST00000490354 VPS33BQ9H267 617 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 CDIP1Q9H305 208 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 SEC61A2Q9H9S3 476 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 SPON1Q9HCB6 807 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 DLL4Q9NR61 685 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 STRIP2Q9ULQ0 834 aa5.35□□□□□ -1.55
RBM39-235ENST00000490354 BCORQ6W2J9 1755 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 COL24A1Q17RW2 1714 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 FAM205AQ6ZU69 1335 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 ZNF532Q9HCE3 1301 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 NPIPB8E9PQR5 432 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 SLC27A2O14975 620 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 SUSD5O60279 629 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 HSPD1P10809 573 aaKnown RBP5.34□□□□□ -1.55
RBM39-235ENST00000490354 PTH1RQ03431 593 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 CHAF1AQ13111 956 aaPredicted RBP5.34□□□□□ -1.55
RBM39-235ENST00000490354 RABEP1Q15276 862 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 SMAD2Q15796 467 aaKnown RBP5.34□□□□□ -1.55
RBM39-235ENST00000490354 CCDC93Q567U6 631 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 TCTN3Q6NUS6 607 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 Q6ZUG5 572 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 GPR155Q7Z3F1 870 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 MAGEB6Q8N7X4 407 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 CLEC4DQ8WXI8 215 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 SNX21Q969T3 373 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 NSUN4Q96CB9 384 aaKnown RBP5.34□□□□□ -1.55
RBM39-235ENST00000490354 GPR101Q96P66 508 aaPredicted RBP5.34□□□□□ -1.55
RBM39-235ENST00000490354 IPO9Q96P70 1041 aaKnown RBP5.34□□□□□ -1.55
RBM39-235ENST00000490354 STRBPQ96SI9 672 aaKnown RBP5.34□□□□□ -1.55
RBM39-235ENST00000490354 PSMD1Q99460 953 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 PUS7LQ9H0K6 701 aaKnown RBP5.34□□□□□ -1.55
RBM39-235ENST00000490354 SLC6A20Q9NP91 592 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 RAI14Q9P0K7 980 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 ABCF2Q9UG63 623 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 SLC4A7Q9Y6M7 1214 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 UBR3Q6ZT12 1888 aa5.34□□□□□ -1.55
RBM39-235ENST00000490354 MAST3O60307 1309 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 M0R2C6 588 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 KRIT1O00522 736 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 SMAD7O15105 426 aaKnown RBP5.33□□□□□ -1.56
RBM39-235ENST00000490354 GPAA1O43292 621 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 MAFKO60675 156 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 KNG1P01042 644 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 ZKSCAN1P17029 563 aaPredicted RBP5.33□□□□□ -1.56
RBM39-235ENST00000490354 GNAT2P19087 354 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 CSF2RBP32927 897 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 FKBP1AP62942 108 aaKnown RBP5.33□□□□□ -1.56
RBM39-235ENST00000490354 GSTO1P78417 241 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 MECOMQ03112 1051 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 FOXE3Q13461 319 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 FHL2Q14192 279 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 ALX1Q15699 326 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 HS1BP3Q53T59 392 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 SLC35F1Q5T1Q4 408 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 LARP1BQ659C4 914 aaKnown RBP5.33□□□□□ -1.56
RBM39-235ENST00000490354 CREB3L3Q68CJ9 461 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 TTLL5Q6EMB2 1281 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 NAA16Q6N069 864 aaPredicted RBP5.33□□□□□ -1.56
RBM39-235ENST00000490354 CYP4F22Q6NT55 531 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 CCDC129Q6ZRS4 1044 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 FAM178BQ8IXR5 827 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 RBM12BQ8IXT5 1001 aaKnown RBP5.33□□□□□ -1.56
RBM39-235ENST00000490354 PIP4K2CQ8TBX8 421 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 LRRC37BQ96QE4 947 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 LMF1Q96S06 567 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 ADOQ96SZ5 270 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 RIOK1Q9BRS2 568 aaKnown RBP5.33□□□□□ -1.56
RBM39-235ENST00000490354 JAM3Q9BX67 310 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 TM6SF1Q9BZW5 370 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 PPARGC1AQ9UBK2 798 aaKnown RBP5.33□□□□□ -1.56
RBM39-235ENST00000490354 CTNNA3Q9UI47 895 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 RBM8AQ9Y5S9 174 aaKnown RBP5.33□□□□□ -1.56
RBM39-235ENST00000490354 SNX14Q9Y5W7 946 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 NPFFR2Q9Y5X5 522 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 COL4A1P02462 1669 aa5.33□□□□□ -1.56
RBM39-235ENST00000490354 SNED1Q8TER0 1413 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms