RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 LRRC27Q9C0I9 530 aa8.61□□□□□ -1.03
SSR1-210ENST00000489567 NRDE2Q9H7Z3 1164 aa8.61□□□□□ -1.03
SSR1-210ENST00000489567 DNAJB4Q9UDY4 337 aa8.61□□□□□ -1.03
SSR1-210ENST00000489567 PARP2Q9UGN5 583 aa8.61□□□□□ -1.03
SSR1-210ENST00000489567 USP25Q9UHP3 1055 aa8.61□□□□□ -1.03
SSR1-210ENST00000489567 GDAQ9Y2T3 454 aa8.61□□□□□ -1.03
SSR1-210ENST00000489567 COL4A4P53420 1690 aaPredicted RBP8.61□□□□□ -1.03
SSR1-210ENST00000489567 NLRC5Q86WI3 1866 aa8.61□□□□□ -1.03
SSR1-210ENST00000489567 NT5C1B-RDH14C9J2C7 533 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 C5orf67F2Z3F1 127 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 PTGESO14684 152 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 HNRNPDLO14979 420 aaKnown RBP8.6□□□□□ -1.03
SSR1-210ENST00000489567 INPPL1O15357 1258 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 FAM189A1O60320 539 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 LIG4P49917 911 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 MCL1Q07820 350 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 DPYDQ12882 1025 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 DCAF4L1Q3SXM0 396 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 TMEM173Q86WV6 379 aaPredicted RBP8.6□□□□□ -1.03
SSR1-210ENST00000489567 THNSL1Q8IYQ7 743 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 PLCD3Q8N3E9 789 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 KLHL23Q8NBE8 558 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 COLGALT1Q8NBJ5 622 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 TCHPQ9BT92 498 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 GBP3Q9H0R5 595 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 ALG13Q9NP73 1137 aaKnown RBP8.6□□□□□ -1.03
SSR1-210ENST00000489567 CACNG4Q9UBN1 327 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 GIT1Q9Y2X7 761 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 PRUNE2Q8WUY3 3088 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 PVALEFA0A1B0GWK0 134 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 H3BNC9 293 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 GRM6O15303 877 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 CLDN3O15551 220 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 ZC3H11AO75152 810 aaKnown RBP eCLIP8.6□□□□□ -1.03
SSR1-210ENST00000489567 ITGB1P05556 798 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 MCF2P10911 925 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 DNAJB1P25685 340 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 ADSSP30520 456 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 TNFSF9P41273 254 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 GRM5P41594 1212 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 FAM160A1Q05DH4 1040 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 STK4Q13043 487 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 CAMK1Q14012 370 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 NOLC1Q14978 699 aaKnown RBP eCLIP8.6□□□□□ -1.03
SSR1-210ENST00000489567 KMT5BQ4FZB7 885 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 FAM26FQ5R3K3 315 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 SPOUT1Q5T280 376 aaKnown RBP8.6□□□□□ -1.03
SSR1-210ENST00000489567 L1TD1Q5T7N2 865 aaKnown RBP8.6□□□□□ -1.03
SSR1-210ENST00000489567 KCNT2Q6UVM3 1135 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 CLEC17AQ6ZS10 378 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 EPM2AIP1Q7L775 607 aaPredicted RBP8.6□□□□□ -1.03
SSR1-210ENST00000489567 SLC17A8Q8NDX2 589 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 ZSWIM2Q8NEG5 633 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 BCL7CQ8WUZ0 217 aaPredicted RBP8.6□□□□□ -1.03
SSR1-210ENST00000489567 ERCC4Q92889 916 aaPredicted RBP8.6□□□□□ -1.03
SSR1-210ENST00000489567 SAMD11Q96NU1 681 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 MRPL9Q9BYD2 267 aaKnown RBP8.6□□□□□ -1.03
SSR1-210ENST00000489567 SLC39A2Q9NP94 309 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 UBN1Q9NPG3 1134 aa8.6□□□□□ -1.03
SSR1-210ENST00000489567 ZMYM2Q9UBW7 1377 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 RALGAPA2Q2PPJ7 1873 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 TRANK1O15050 2925 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 A0A0B4J269 797 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 F8W810 466 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 PRPF40AO75400 957 aaKnown RBP8.59□□□□□ -1.03
SSR1-210ENST00000489567 CSPG5O95196 566 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 RPN1P04843 607 aaKnown RBP8.59□□□□□ -1.03
SSR1-210ENST00000489567 GALTP07902 379 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 SCP2P22307 547 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 IGFBP4P22692 258 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 SLC11A1P49279 550 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 BCAR1P56945 870 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 RNASELQ05823 741 aaKnown RBP8.59□□□□□ -1.03
SSR1-210ENST00000489567 DSC1Q08554 894 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 GPM6BQ13491 265 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 PNOCQ13519 176 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 NAB2Q15742 525 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 GLRA4Q5JXX5 417 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 COLGALT2Q8IYK4 626 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 HACE1Q8IYU2 909 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 TMEM130Q8N3G9 435 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 KIAA0895Q8NCT3 520 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 URGCPQ8TCY9 931 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 SCFD1Q8WVM8 642 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 RABGGTAQ92696 567 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 HVCN1Q96D96 273 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 ZMAT2Q96NC0 199 aaKnown RBP8.59□□□□□ -1.03
SSR1-210ENST00000489567 ACCSQ96QU6 501 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 PAAF1Q9BRP4 392 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 PLVAPQ9BX97 442 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 PCDHB13Q9Y5F0 798 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 MTCH2Q9Y6C9 303 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 STYXL1Q9Y6J8 313 aa8.59□□□□□ -1.03
SSR1-210ENST00000489567 FGF18O76093 207 aa8.58□□□□□ -1.04
SSR1-210ENST00000489567 RB1P06400 928 aa8.58□□□□□ -1.04
SSR1-210ENST00000489567 FOSL2P15408 326 aa8.58□□□□□ -1.04
SSR1-210ENST00000489567 LAG3P18627 525 aa8.58□□□□□ -1.04
SSR1-210ENST00000489567 IGFBP6P24592 240 aaPredicted RBP8.58□□□□□ -1.04
SSR1-210ENST00000489567 MATR3P43243 847 aaKnown RBP eCLIP8.58□□□□□ -1.04
SSR1-210ENST00000489567 POSTNQ15063 836 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms