RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 STK39Q9UEW8 545 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 DUSP12Q9UNI6 340 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 ZMYM2Q9UBW7 1377 aa13.04□□□□□ -0.32
ACTN4-206ENST00000489451 COL4A3Q01955 1670 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 CCDC195A0A1B0GUA6 201 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 GLUD1P00367 558 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 ADH1AP07327 375 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 SPATA31D3P0C874 917 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 RPL17P18621 184 aaKnown RBP13.03□□□□□ -0.32
ACTN4-206ENST00000489451 MCM7P33993 719 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 NEK4P51957 841 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 GRIK3Q13003 919 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 ECM1Q16610 540 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 ASTLQ6HA08 431 aaPredicted RBP13.03□□□□□ -0.32
ACTN4-206ENST00000489451 SLC27A1Q6PCB7 646 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 SPATA31D4Q6ZUB0 917 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 OTOP3Q7RTS5 596 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 CCDC113Q9H0I3 377 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 PDZD7Q9H5P4 517 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 BRMS1Q9HCU9 246 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 TPRP12270 2363 aaKnown RBP13.03□□□□□ -0.32
ACTN4-206ENST00000489451 CLUHO75153 1309 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 NOTCH4Q99466 2003 aa13.03□□□□□ -0.32
ACTN4-206ENST00000489451 LRRIQ4A6NIV6 560 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 TGM5O43548 720 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 KIF4AO95239 1232 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 XRCC6P12956 609 aaKnown RBP eCLIP13.02□□□□□ -0.33
ACTN4-206ENST00000489451 ATP2B1P20020 1258 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 TDGQ13569 410 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 FAM187BQ17R55 369 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 RTP2Q5QGT7 225 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 EEF1DP3Q658K8 133 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 PRSS55Q6UWB4 352 aaPredicted RBP13.02□□□□□ -0.33
ACTN4-206ENST00000489451 PALB2Q86YC2 1186 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 GLYCTKQ8IVS8 523 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 KIAA2013Q8IYS2 634 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 HASPINQ8TF76 798 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 KIFC3Q9BVG8 833 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 TRIM6Q9C030 488 aaPredicted RBP13.02□□□□□ -0.33
ACTN4-206ENST00000489451 TUFT1Q9NNX1 390 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 ADAM28Q9UKQ2 775 aa13.02□□□□□ -0.33
ACTN4-206ENST00000489451 CFAP47Q6ZTR5 3102 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 DNAH14Q0VDD8 3507 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 KRBA1A5PL33 1030 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 CASTOR2A6NHX0 329 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 ADAM12O43184 909 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 CLCN5P51795 746 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 NBR1Q14596 966 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 ACAP1Q15027 740 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 GPR65Q8IYL9 337 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 C4orf32Q8N8J7 132 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 RIN2Q8WYP3 895 aaPredicted RBP13.01□□□□□ -0.33
ACTN4-206ENST00000489451 SMG7Q92540 1137 aaKnown RBP13.01□□□□□ -0.33
ACTN4-206ENST00000489451 ACSF2Q96CM8 615 aaPredicted RBP13.01□□□□□ -0.33
ACTN4-206ENST00000489451 POLR3CQ9BUI4 534 aaPredicted RBP13.01□□□□□ -0.33
ACTN4-206ENST00000489451 COLEC11Q9BWP8 271 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 NT5C3AQ9H0P0 336 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 POLD4Q9HCU8 107 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 SNTG2Q9NY99 539 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 FNIP2Q9P278 1114 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 EPS15L1Q9UBC2 864 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 PARP2Q9UGN5 583 aa13.01□□□□□ -0.33
ACTN4-206ENST00000489451 ACACBO00763 2458 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 MYH15Q9Y2K3 1946 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 RECQL4O94761 1208 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 OR52Z1P0C646 297 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 AOC1P19801 751 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 RPA1P27694 616 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 TUSC3Q13454 348 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 HSP90AA2PQ14568 343 aaPredicted RBP13□□□□□ -0.33
ACTN4-206ENST00000489451 ZNF174Q15697 407 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 USP41Q3LFD5 358 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 PADI6Q6TGC4 694 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 CD300LGQ6UXG3 332 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 NOSTRINQ8IVI9 506 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 CCDC83Q8IWF9 413 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 MCPH1Q8NEM0 835 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 ST13P5Q8NFI4 369 aaPredicted RBP13□□□□□ -0.33
ACTN4-206ENST00000489451 LNX1Q8TBB1 728 aaPredicted RBP13□□□□□ -0.33
ACTN4-206ENST00000489451 KCNG4Q8TDN1 519 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 PRIMPOLQ96LW4 560 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 KIF2CQ99661 725 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 CLSTN3Q9BQT9 956 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 PRMT7Q9NVM4 692 aaPredicted RBP13□□□□□ -0.33
ACTN4-206ENST00000489451 SSX2IPQ9Y2D8 614 aa13□□□□□ -0.33
ACTN4-206ENST00000489451 C1RP00736 705 aa12.99□□□□□ -0.33
ACTN4-206ENST00000489451 PRKCBP05771 671 aa12.99□□□□□ -0.33
ACTN4-206ENST00000489451 CYP11B2P19099 503 aa12.99□□□□□ -0.33
ACTN4-206ENST00000489451 NCBP1Q09161 790 aaKnown RBP12.99□□□□□ -0.33
ACTN4-206ENST00000489451 NT5DC1Q5TFE4 455 aa12.99□□□□□ -0.33
ACTN4-206ENST00000489451 CYP26C1Q6V0L0 522 aa12.99□□□□□ -0.33
ACTN4-206ENST00000489451 HACE1Q8IYU2 909 aa12.99□□□□□ -0.33
ACTN4-206ENST00000489451 SIX5Q8N196 739 aa12.99□□□□□ -0.33
ACTN4-206ENST00000489451 SLC44A3Q8N4M1 653 aa12.99□□□□□ -0.33
ACTN4-206ENST00000489451 FLCNQ8NFG4 579 aa12.99□□□□□ -0.33
ACTN4-206ENST00000489451 HDAC7Q8WUI4 952 aa12.99□□□□□ -0.33
ACTN4-206ENST00000489451 CCDC43Q96MW1 224 aaKnown RBP12.99□□□□□ -0.33
ACTN4-206ENST00000489451 HINFPQ9BQA5 517 aa12.99□□□□□ -0.33
ACTN4-206ENST00000489451 PRKD2Q9BZL6 878 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms