RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 SMG1Q96Q15 3661 aaKnown RBP10.35□□□□□ -0.75
SSBP1-212ENST00000489378 A0A087WZ62 844 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 FAM86B1E9PN63 330 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 MAST4O15021 2626 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 ZNF862O60290 1169 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 FOXD2O60548 495 aaPredicted RBP10.34□□□□□ -0.75
SSBP1-212ENST00000489378 NR1I2O75469 434 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 FAM86B2P0C5J1 330 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 OR1G1P47890 313 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 RAB27AP51159 221 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 ANTXR2P58335 489 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 PRR20EP86478 221 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 PRR20CP86479 221 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 PRR20DP86480 221 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 PRR20BP86481 221 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 PRR20AP86496 221 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 SATB1Q01826 763 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 HEATR3Q7Z4Q2 680 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 PLA2G4DQ86XP0 818 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 COLGALT2Q8IYK4 626 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 ZNF654Q8IZM8 581 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 FAM160A2Q8N612 972 aaPredicted RBP10.34□□□□□ -0.75
SSBP1-212ENST00000489378 IGDCC4Q8TDY8 1250 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 PGBD4Q96DM1 585 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 FDXACB1Q9BRP7 624 aaPredicted RBP10.34□□□□□ -0.75
SSBP1-212ENST00000489378 HELZ2Q9BYK8 2649 aaKnown RBP10.34□□□□□ -0.75
SSBP1-212ENST00000489378 ANO3Q9BYT9 981 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 RSAD1Q9HA92 442 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 CHST7Q9NS84 486 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 SPAG17Q6Q759 2223 aa10.34□□□□□ -0.75
SSBP1-212ENST00000489378 ITPR1Q14643 2758 aa10.33□□□□□ -0.75
SSBP1-212ENST00000489378 IGLV3-22A0A075B6J6 115 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 IPO5O00410 1097 aaKnown RBP10.33□□□□□ -0.76
SSBP1-212ENST00000489378 CCL16O15467 120 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 DDAH1O94760 285 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 C1RP00736 705 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 PSAPP07602 524 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 RXRAP19793 462 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 SFPQP23246 707 aaKnown RBP eCLIP10.33□□□□□ -0.76
SSBP1-212ENST00000489378 ZNF76P36508 570 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 SREBF1P36956 1147 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 CCR3P51677 355 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 PPP2R5DQ14738 602 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 STPG1Q5TH74 334 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 PSAPL1Q6NUJ1 521 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 ZNF746Q6NUN9 644 aaPredicted RBP10.33□□□□□ -0.76
SSBP1-212ENST00000489378 NIPA1Q7RTP0 329 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 MRPL10Q7Z7H8 261 aaKnown RBP10.33□□□□□ -0.76
SSBP1-212ENST00000489378 NPAS3Q8IXF0 933 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 ING5Q8WYH8 240 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 FAM167AQ96KS9 214 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 MAP3K14Q99558 947 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 LZTS2Q9BRK4 669 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 LSM14BQ9BX40 385 aaKnown RBP10.33□□□□□ -0.76
SSBP1-212ENST00000489378 GPR62Q9BZJ7 368 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 LMAN1LQ9HAT1 526 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 KANSL3Q9P2N6 904 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 WASF3Q9UPY6 502 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 PCDHA10Q9Y5I2 948 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 TOP3BO95985 862 aaKnown RBP10.33□□□□□ -0.76
SSBP1-212ENST00000489378 CYP21A2P08686 494 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 HOXC13P31276 330 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 CXCL12P48061 93 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 PRKCEQ02156 737 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 FOXC1Q12948 553 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 GAS6Q14393 721 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 SART3Q15020 963 aaKnown RBP10.33□□□□□ -0.76
SSBP1-212ENST00000489378 UGCGQ16739 394 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 HEATR6Q6AI08 1181 aaKnown RBP10.33□□□□□ -0.76
SSBP1-212ENST00000489378 CATSPER4Q7RTX7 472 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 CCDC82Q8N4S0 544 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 C12orf50Q8NA57 414 aaPredicted RBP10.33□□□□□ -0.76
SSBP1-212ENST00000489378 MBOAT7Q96N66 472 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 HCFC1R1Q9NWW0 138 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 FNIP2Q9P278 1114 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 FBXW11Q9UKB1 542 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 POLIQ9UNA4 740 aa10.33□□□□□ -0.76
SSBP1-212ENST00000489378 LAMA1P25391 3075 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 LOC400499M0QZD8 3231 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 TAF4O00268 1085 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 GIPC1O14908 333 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 AXIN1O15169 862 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 ECI2O75521 394 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 HNRNPA1P09651 372 aaKnown RBP eCLIP10.32□□□□□ -0.76
SSBP1-212ENST00000489378 GNAQP50148 359 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 DSC1Q08554 894 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 PPM1LQ5SGD2 360 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 UBXN11Q5T124 520 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 WWC2Q6AWC2 1192 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 PRSS55Q6UWB4 352 aaPredicted RBP10.32□□□□□ -0.76
SSBP1-212ENST00000489378 RALYLQ86SE5 291 aaKnown RBP10.32□□□□□ -0.76
SSBP1-212ENST00000489378 RAB11FIP4Q86YS3 637 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 KSR1Q8IVT5 923 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 SMAP1Q8IYB5 467 aaPredicted RBP10.32□□□□□ -0.76
SSBP1-212ENST00000489378 ZCCHC14Q8WYQ9 949 aaKnown RBP10.32□□□□□ -0.76
SSBP1-212ENST00000489378 GATA6Q92908 595 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 ZNF577Q9BSK1 485 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 IER2Q9BTL4 223 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 SLC6A16Q9GZN6 736 aa10.32□□□□□ -0.76
SSBP1-212ENST00000489378 ARRDC1-AS1Q9H2J1 176 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms