RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 STX6O43752 255 aa27.46■■□□□ 1.99
HMGN1-217ENST00000489072 NR1I2O75469 434 aa27.46■■□□□ 1.99
HMGN1-217ENST00000489072 EPCAMP16422 314 aa27.46■■□□□ 1.99
HMGN1-217ENST00000489072 HOXB8P17481 243 aaPredicted RBP27.46■■□□□ 1.99
HMGN1-217ENST00000489072 NAB2Q15742 525 aa27.46■■□□□ 1.99
HMGN1-217ENST00000489072 SPECC1Q5M775 1068 aa27.46■■□□□ 1.99
HMGN1-217ENST00000489072 USP49Q70CQ1 688 aa27.46■■□□□ 1.99
HMGN1-217ENST00000489072 KLHL5Q96PQ7 755 aa27.46■■□□□ 1.99
HMGN1-217ENST00000489072 POP1Q99575 1024 aaKnown RBP27.46■■□□□ 1.99
HMGN1-217ENST00000489072 COLEC11Q9BWP8 271 aa27.46■■□□□ 1.99
HMGN1-217ENST00000489072 MRPL4Q9BYD3 311 aaKnown RBP27.46■■□□□ 1.99
HMGN1-217ENST00000489072 CDT1Q9H211 546 aa27.46■■□□□ 1.99
HMGN1-217ENST00000489072 CDH22Q9UJ99 828 aa27.46■■□□□ 1.99
HMGN1-217ENST00000489072 FBXO2Q9UK22 296 aaPredicted RBP27.46■■□□□ 1.99
HMGN1-217ENST00000489072 PI4K2BG5E9Z4 385 aa27.45■■□□□ 1.98
HMGN1-217ENST00000489072 CNPP09543 421 aaKnown RBP27.45■■□□□ 1.98
HMGN1-217ENST00000489072 CEBPZQ03701 1054 aaKnown RBP27.45■■□□□ 1.98
HMGN1-217ENST00000489072 TUSC3Q13454 348 aa27.45■■□□□ 1.98
HMGN1-217ENST00000489072 DHX8Q14562 1220 aaKnown RBP27.45■■□□□ 1.98
HMGN1-217ENST00000489072 MCM6Q14566 821 aa27.45■■□□□ 1.98
HMGN1-217ENST00000489072 GPBP1Q86WP2 473 aa27.45■■□□□ 1.98
HMGN1-217ENST00000489072 CEP120Q8N960 986 aa27.45■■□□□ 1.98
HMGN1-217ENST00000489072 TMEM87AQ8NBN3 555 aa27.45■■□□□ 1.98
HMGN1-217ENST00000489072 TMEM161BQ8NDZ6 487 aa27.45■■□□□ 1.98
HMGN1-217ENST00000489072 EPSTI1Q96J88 318 aa27.45■■□□□ 1.98
HMGN1-217ENST00000489072 MRPL17Q9NRX2 175 aaKnown RBP27.45■■□□□ 1.98
HMGN1-217ENST00000489072 C2CD2LO14523 706 aa27.44■■□□□ 1.98
HMGN1-217ENST00000489072 ABLIM1O14639 778 aa27.44■■□□□ 1.98
HMGN1-217ENST00000489072 URODP06132 367 aa27.44■■□□□ 1.98
HMGN1-217ENST00000489072 THP07101 528 aa27.44■■□□□ 1.98
HMGN1-217ENST00000489072 ZNF568Q3ZCX4 644 aa27.44■■□□□ 1.98
HMGN1-217ENST00000489072 RAD54LQ92698 747 aa27.44■■□□□ 1.98
HMGN1-217ENST00000489072 USP28Q96RU2 1077 aa27.44■■□□□ 1.98
HMGN1-217ENST00000489072 REEP2Q9BRK0 252 aa27.44■■□□□ 1.98
HMGN1-217ENST00000489072 GPR62Q9BZJ7 368 aa27.44■■□□□ 1.98
HMGN1-217ENST00000489072 CCSER1Q9C0I3 900 aa27.44■■□□□ 1.98
HMGN1-217ENST00000489072 ADAM28Q9UKQ2 775 aa27.44■■□□□ 1.98
HMGN1-217ENST00000489072 PLXNA3P51805 1871 aa27.44■■□□□ 1.98
HMGN1-217ENST00000489072 CITO14578 2027 aa27.43■■□□□ 1.98
HMGN1-217ENST00000489072 CASTOR2A6NHX0 329 aa27.43■■□□□ 1.98
HMGN1-217ENST00000489072 MAPTP10636 758 aaKnown RBP27.43■■□□□ 1.98
HMGN1-217ENST00000489072 PROZP22891 400 aa27.43■■□□□ 1.98
HMGN1-217ENST00000489072 HSP90AA2PQ14568 343 aaPredicted RBP27.43■■□□□ 1.98
HMGN1-217ENST00000489072 TPRNQ4KMQ1 711 aa27.43■■□□□ 1.98
HMGN1-217ENST00000489072 KIAA0319Q5VV43 1072 aa27.43■■□□□ 1.98
HMGN1-217ENST00000489072 FUT10Q6P4F1 479 aa27.43■■□□□ 1.98
HMGN1-217ENST00000489072 RASSF8Q8NHQ8 419 aa27.43■■□□□ 1.98
HMGN1-217ENST00000489072 B3GALT6Q96L58 329 aa27.43■■□□□ 1.98
HMGN1-217ENST00000489072 CLIC6Q96NY7 704 aa27.43■■□□□ 1.98
HMGN1-217ENST00000489072 PHF7Q9BWX1 381 aaPredicted RBP27.43■■□□□ 1.98
HMGN1-217ENST00000489072 C1QTNF1Q9BXJ1 281 aa27.43■■□□□ 1.98
HMGN1-217ENST00000489072 EMILIN2Q9BXX0 1053 aa27.43■■□□□ 1.98
HMGN1-217ENST00000489072 DAXXQ9UER7 740 aaPredicted RBP27.43■■□□□ 1.98
HMGN1-217ENST00000489072 SRPRBQ9Y5M8 271 aaKnown RBP27.43■■□□□ 1.98
HMGN1-217ENST00000489072 LOC730098B7Z3J9 87 aa27.42■■□□□ 1.98
HMGN1-217ENST00000489072 GRM5P41594 1212 aa27.42■■□□□ 1.98
HMGN1-217ENST00000489072 GLUD2P49448 558 aa27.42■■□□□ 1.98
HMGN1-217ENST00000489072 CLCN4P51793 760 aa27.42■■□□□ 1.98
HMGN1-217ENST00000489072 SMTNP53814 917 aa27.42■■□□□ 1.98
HMGN1-217ENST00000489072 DSG1Q02413 1049 aa27.42■■□□□ 1.98
HMGN1-217ENST00000489072 CBX2Q14781 532 aaPredicted RBP27.42■■□□□ 1.98
HMGN1-217ENST00000489072 KANK3Q6NY19 840 aa27.42■■□□□ 1.98
HMGN1-217ENST00000489072 APBB1IPQ7Z5R6 666 aaPredicted RBP27.42■■□□□ 1.98
HMGN1-217ENST00000489072 ZBTB33Q86T24 672 aa27.42■■□□□ 1.98
HMGN1-217ENST00000489072 C12orf76Q8N812 135 aaPredicted RBP27.42■■□□□ 1.98
HMGN1-217ENST00000489072 ZBTB45Q96K62 511 aaPredicted RBP27.42■■□□□ 1.98
HMGN1-217ENST00000489072 ZSCAN16Q9H4T2 348 aaPredicted RBP27.42■■□□□ 1.98
HMGN1-217ENST00000489072 CHST7Q9NS84 486 aa27.42■■□□□ 1.98
HMGN1-217ENST00000489072 ODF2LQ9ULJ1 636 aa27.42■■□□□ 1.98
HMGN1-217ENST00000489072 KLRC2P26717 231 aa27.41■■□□□ 1.98
HMGN1-217ENST00000489072 NCKAP1LP55160 1127 aa27.41■■□□□ 1.98
HMGN1-217ENST00000489072 OSTNP61366 133 aa27.41■■□□□ 1.98
HMGN1-217ENST00000489072 GLRA4Q5JXX5 417 aa27.41■■□□□ 1.98
HMGN1-217ENST00000489072 PPFIBP1Q86W92 1011 aa27.41■■□□□ 1.98
HMGN1-217ENST00000489072 FEZF2Q8TBJ5 459 aa27.41■■□□□ 1.98
HMGN1-217ENST00000489072 PPP1R10Q96QC0 940 aaKnown RBP27.41■■□□□ 1.98
HMGN1-217ENST00000489072 ADAM7Q9H2U9 754 aa27.41■■□□□ 1.98
HMGN1-217ENST00000489072 C11orf16Q9NQ32 467 aa27.41■■□□□ 1.98
HMGN1-217ENST00000489072 DZANK1Q9NVP4 752 aa27.41■■□□□ 1.98
HMGN1-217ENST00000489072 LARSQ9P2J5 1176 aaKnown RBP27.41■■□□□ 1.98
HMGN1-217ENST00000489072 KCNG1Q9UIX4 513 aa27.41■■□□□ 1.98
HMGN1-217ENST00000489072 KIF4AO95239 1232 aa27.4■■□□□ 1.98
HMGN1-217ENST00000489072 BRD1O95696 1058 aa27.4■■□□□ 1.98
HMGN1-217ENST00000489072 MCF2P10911 925 aa27.4■■□□□ 1.98
HMGN1-217ENST00000489072 STRN3Q13033 797 aa27.4■■□□□ 1.98
HMGN1-217ENST00000489072 RARS2Q5T160 578 aaKnown RBP27.4■■□□□ 1.98
HMGN1-217ENST00000489072 MPZL3Q6UWV2 235 aa27.4■■□□□ 1.98
HMGN1-217ENST00000489072 HSCBQ8IWL3 235 aa27.4■■□□□ 1.98
HMGN1-217ENST00000489072 HASPINQ8TF76 798 aa27.4■■□□□ 1.98
HMGN1-217ENST00000489072 LARP4BQ92615 738 aaKnown RBP27.4■■□□□ 1.98
HMGN1-217ENST00000489072 CCDC94Q9BW85 323 aaPredicted RBP27.4■■□□□ 1.98
HMGN1-217ENST00000489072 RXFP1Q9HBX9 757 aa27.4■■□□□ 1.98
HMGN1-217ENST00000489072 SSX2IPQ9Y2D8 614 aa27.4■■□□□ 1.98
HMGN1-217ENST00000489072 VWA8A3KMH1 1905 aa27.39■■□□□ 1.98
HMGN1-217ENST00000489072 TEX28O15482 410 aa27.39■■□□□ 1.98
HMGN1-217ENST00000489072 TADA2AO75478 443 aa27.39■■□□□ 1.98
HMGN1-217ENST00000489072 ZNF131P52739 623 aa27.39■■□□□ 1.98
HMGN1-217ENST00000489072 ITIH3Q06033 890 aa27.39■■□□□ 1.98
HMGN1-217ENST00000489072 SLC39A14Q15043 492 aa27.39■■□□□ 1.98
HMGN1-217ENST00000489072 ALKAL1Q6UXT8 129 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms