RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 DSG1Q02413 1049 aa25.32■■□□□ 1.64
COL9A3-213ENST00000489045 DMP1Q13316 513 aaPredicted RBP25.32■■□□□ 1.64
COL9A3-213ENST00000489045 TUSC3Q13454 348 aa25.32■■□□□ 1.64
COL9A3-213ENST00000489045 ARL6IP4Q66PJ3 421 aaKnown RBP25.32■■□□□ 1.64
COL9A3-213ENST00000489045 FEZF2Q8TBJ5 459 aa25.32■■□□□ 1.64
COL9A3-213ENST00000489045 B3GALT6Q96L58 329 aa25.32■■□□□ 1.64
COL9A3-213ENST00000489045 PLIN2Q99541 437 aa25.32■■□□□ 1.64
COL9A3-213ENST00000489045 PAAF1Q9BRP4 392 aa25.32■■□□□ 1.64
COL9A3-213ENST00000489045 GPR62Q9BZJ7 368 aa25.32■■□□□ 1.64
COL9A3-213ENST00000489045 CXCL16Q9H2A7 254 aa25.32■■□□□ 1.64
COL9A3-213ENST00000489045 SFXN1Q9H9B4 322 aa25.32■■□□□ 1.64
COL9A3-213ENST00000489045 GDAQ9Y2T3 454 aa25.32■■□□□ 1.64
COL9A3-213ENST00000489045 NR2E1Q9Y466 385 aa25.32■■□□□ 1.64
COL9A3-213ENST00000489045 CASTOR2A6NHX0 329 aa25.31■■□□□ 1.64
COL9A3-213ENST00000489045 TEX28O15482 410 aa25.31■■□□□ 1.64
COL9A3-213ENST00000489045 THP07101 528 aa25.31■■□□□ 1.64
COL9A3-213ENST00000489045 ADH1AP07327 375 aa25.31■■□□□ 1.64
COL9A3-213ENST00000489045 HSP90AA2PQ14568 343 aaPredicted RBP25.31■■□□□ 1.64
COL9A3-213ENST00000489045 TMC5Q6UXY8 1006 aa25.31■■□□□ 1.64
COL9A3-213ENST00000489045 NT5C3AQ9H0P0 336 aa25.31■■□□□ 1.64
COL9A3-213ENST00000489045 CHST7Q9NS84 486 aa25.31■■□□□ 1.64
COL9A3-213ENST00000489045 ARHGAP28Q9P2N2 729 aa25.31■■□□□ 1.64
COL9A3-213ENST00000489045 TADA2AO75478 443 aa25.3■■□□□ 1.64
COL9A3-213ENST00000489045 ZXDAP98168 799 aa25.3■■□□□ 1.64
COL9A3-213ENST00000489045 CUL4AQ13619 759 aa25.3■■□□□ 1.64
COL9A3-213ENST00000489045 ATAT1Q5SQI0 421 aa25.3■■□□□ 1.64
COL9A3-213ENST00000489045 HFE2Q6ZVN8 426 aa25.3■■□□□ 1.64
COL9A3-213ENST00000489045 CDK5RAP3Q96JB5 506 aa25.3■■□□□ 1.64
COL9A3-213ENST00000489045 TIPINQ9BVW5 301 aa25.3■■□□□ 1.64
COL9A3-213ENST00000489045 TMEM134Q9H6X4 195 aa25.3■■□□□ 1.64
COL9A3-213ENST00000489045 RXFP1Q9HBX9 757 aa25.3■■□□□ 1.64
COL9A3-213ENST00000489045 KMT5AQ9NQR1 393 aa25.3■■□□□ 1.64
COL9A3-213ENST00000489045 TNFSF13BQ9Y275 285 aa25.3■■□□□ 1.64
COL9A3-213ENST00000489045 CITO14578 2027 aa25.29■■□□□ 1.64
COL9A3-213ENST00000489045 MYO10Q9HD67 2058 aa25.29■■□□□ 1.64
COL9A3-213ENST00000489045 C2CD4DB7Z1M9 353 aa25.29■■□□□ 1.64
COL9A3-213ENST00000489045 GUCY2CP25092 1073 aa25.29■■□□□ 1.64
COL9A3-213ENST00000489045 RAD51AP2Q09MP3 1159 aa25.29■■□□□ 1.64
COL9A3-213ENST00000489045 NAB2Q15742 525 aa25.29■■□□□ 1.64
COL9A3-213ENST00000489045 USP41Q3LFD5 358 aa25.29■■□□□ 1.64
COL9A3-213ENST00000489045 TAS1R3Q7RTX0 852 aa25.29■■□□□ 1.64
COL9A3-213ENST00000489045 BRAPQ7Z569 592 aa25.29■■□□□ 1.64
COL9A3-213ENST00000489045 APBB1IPQ7Z5R6 666 aaPredicted RBP25.29■■□□□ 1.64
COL9A3-213ENST00000489045 KCTD17Q8N5Z5 321 aa25.29■■□□□ 1.64
COL9A3-213ENST00000489045 HASPINQ8TF76 798 aa25.29■■□□□ 1.64
COL9A3-213ENST00000489045 ACO2Q99798 780 aaKnown RBP25.29■■□□□ 1.64
COL9A3-213ENST00000489045 MAN1C1Q9NR34 630 aa25.29■■□□□ 1.64
COL9A3-213ENST00000489045 VWA8A3KMH1 1905 aa25.29■■□□□ 1.64
COL9A3-213ENST00000489045 SFI1A8K8P3 1242 aa25.28■■□□□ 1.64
COL9A3-213ENST00000489045 KIF4AO95239 1232 aa25.28■■□□□ 1.64
COL9A3-213ENST00000489045 PTPN21Q16825 1174 aa25.28■■□□□ 1.64
COL9A3-213ENST00000489045 TMEM119Q4V9L6 283 aa25.28■■□□□ 1.64
COL9A3-213ENST00000489045 TRIM67Q6ZTA4 783 aa25.28■■□□□ 1.64
COL9A3-213ENST00000489045 GPR149Q86SP6 731 aa25.28■■□□□ 1.64
COL9A3-213ENST00000489045 SYT2Q8N9I0 419 aaPredicted RBP25.28■■□□□ 1.64
COL9A3-213ENST00000489045 RIN2Q8WYP3 895 aaPredicted RBP25.28■■□□□ 1.64
COL9A3-213ENST00000489045 MRPL4Q9BYD3 311 aaKnown RBP25.28■■□□□ 1.64
COL9A3-213ENST00000489045 C17orf75Q9HAS0 396 aa25.28■■□□□ 1.64
COL9A3-213ENST00000489045 DAXXQ9UER7 740 aaPredicted RBP25.28■■□□□ 1.64
COL9A3-213ENST00000489045 RBM19Q9Y4C8 960 aaKnown RBP25.28■■□□□ 1.64
COL9A3-213ENST00000489045 SF3B1O75533 1304 aaKnown RBP eCLIP25.28■■□□□ 1.64
COL9A3-213ENST00000489045 ZNF318Q5VUA4 2279 aa25.28■■□□□ 1.64
COL9A3-213ENST00000489045 VPS37CA5D8V6 355 aaPredicted RBP25.27■■□□□ 1.64
COL9A3-213ENST00000489045 SLC16A4O15374 487 aa25.27■■□□□ 1.64
COL9A3-213ENST00000489045 GLUD1P00367 558 aa25.27■■□□□ 1.64
COL9A3-213ENST00000489045 PLA2G4BP0C869 781 aa25.27■■□□□ 1.64
COL9A3-213ENST00000489045 SLC12A3P55017 1021 aa25.27■■□□□ 1.64
COL9A3-213ENST00000489045 ZNF568Q3ZCX4 644 aa25.27■■□□□ 1.64
COL9A3-213ENST00000489045 CEP120Q8N960 986 aa25.27■■□□□ 1.64
COL9A3-213ENST00000489045 AK8Q96MA6 479 aa25.27■■□□□ 1.64
COL9A3-213ENST00000489045 TARS2Q9BW92 718 aaKnown RBP25.27■■□□□ 1.64
COL9A3-213ENST00000489045 CDT1Q9H211 546 aa25.27■■□□□ 1.64
COL9A3-213ENST00000489045 ARIH1Q9Y4X5 557 aaPredicted RBP25.27■■□□□ 1.64
COL9A3-213ENST00000489045 PDCD11Q14690 1871 aaKnown RBP25.26■■□□□ 1.63
COL9A3-213ENST00000489045 PLA2G5P39877 138 aa25.26■■□□□ 1.63
COL9A3-213ENST00000489045 GLRA4Q5JXX5 417 aa25.26■■□□□ 1.63
COL9A3-213ENST00000489045 ZBTB33Q86T24 672 aa25.26■■□□□ 1.63
COL9A3-213ENST00000489045 GLYCTKQ8IVS8 523 aa25.26■■□□□ 1.63
COL9A3-213ENST00000489045 GPR65Q8IYL9 337 aa25.26■■□□□ 1.63
COL9A3-213ENST00000489045 TDRD5Q8NAT2 981 aaKnown RBP25.26■■□□□ 1.63
COL9A3-213ENST00000489045 PTPRHQ9HD43 1115 aa25.26■■□□□ 1.63
COL9A3-213ENST00000489045 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.26■■□□□ 1.63
COL9A3-213ENST00000489045 MUC6Q6W4X9 2439 aa25.26■■□□□ 1.63
COL9A3-213ENST00000489045 TMEM221A6NGB7 291 aa25.25■■□□□ 1.63
COL9A3-213ENST00000489045 M0R296 226 aa25.25■■□□□ 1.63
COL9A3-213ENST00000489045 BMP15O95972 392 aa25.25■■□□□ 1.63
COL9A3-213ENST00000489045 MYBP10242 640 aa25.25■■□□□ 1.63
COL9A3-213ENST00000489045 PLS3P13797 630 aa25.25■■□□□ 1.63
COL9A3-213ENST00000489045 GRM5P41594 1212 aa25.25■■□□□ 1.63
COL9A3-213ENST00000489045 RTP2Q5QGT7 225 aa25.25■■□□□ 1.63
COL9A3-213ENST00000489045 PALB2Q86YC2 1186 aa25.25■■□□□ 1.63
COL9A3-213ENST00000489045 FAM122AQ96E09 287 aa25.25■■□□□ 1.63
COL9A3-213ENST00000489045 PPP1R10Q96QC0 940 aaKnown RBP25.25■■□□□ 1.63
COL9A3-213ENST00000489045 KCND2Q9NZV8 630 aa25.25■■□□□ 1.63
COL9A3-213ENST00000489045 FNIP2Q9P278 1114 aa25.25■■□□□ 1.63
COL9A3-213ENST00000489045 NPHP3-ACAD11A0A0J9YXS1 232 aa25.24■■□□□ 1.63
COL9A3-213ENST00000489045 RPL17P18621 184 aaKnown RBP25.24■■□□□ 1.63
COL9A3-213ENST00000489045 OSTNP61366 133 aa25.24■■□□□ 1.63
COL9A3-213ENST00000489045 CACNB1Q02641 598 aaPredicted RBP25.24■■□□□ 1.63
COL9A3-213ENST00000489045 SF3A1Q15459 793 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms