RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TOM1L1O75674 476 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 HARSP12081 509 aaKnown RBP15.65■□□□□ 0.1
BRCA1-218ENST00000489037 GTF2F1P35269 517 aaKnown RBP eCLIP15.65■□□□□ 0.14e-8■■■□□ 16.5
BRCA1-218ENST00000489037 GRM5P41594 1212 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 KCNQ1P51787 676 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 ZNF131P52739 623 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 DSC1Q08554 894 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 PKP1Q13835 747 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 COL19A1Q14993 1142 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 DUSP6Q16828 381 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 TAS1R3Q7RTX0 852 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 LRRC15Q8TF66 581 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 DDX12PQ92771 950 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 ACAP3Q96P50 834 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 COL25A1Q9BXS0 654 aaPredicted RBP15.65■□□□□ 0.1
BRCA1-218ENST00000489037 CDT1Q9H211 546 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 ANKFY1Q9P2R3 1169 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 SSX2IPQ9Y2D8 614 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 PCDHGC5Q9Y5F6 944 aa15.65■□□□□ 0.1
BRCA1-218ENST00000489037 H3BQ06 376 aaPredicted RBP15.64■□□□□ 0.09
BRCA1-218ENST00000489037 CLDN3O15551 220 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 CTSAP10619 480 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 BMP1P13497 986 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 GAP43P17677 238 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 LIG4P49917 911 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 AMPD3Q01432 767 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 DNM1Q05193 864 aaKnown RBP15.64■□□□□ 0.09
BRCA1-218ENST00000489037 TUSC3Q13454 348 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 NOLC1Q14978 699 aaKnown RBP eCLIP15.64■□□□□ 0.09
BRCA1-218ENST00000489037 CTC1Q2NKJ3 1217 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 PTCRAQ6ISU1 281 aaPredicted RBP15.64■□□□□ 0.09
BRCA1-218ENST00000489037 TMEM173Q86WV6 379 aaPredicted RBP15.64■□□□□ 0.09
BRCA1-218ENST00000489037 MRPL43Q8N983 215 aaKnown RBP15.64■□□□□ 0.09
BRCA1-218ENST00000489037 IQUBQ8NA54 791 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 ADAMTS19Q8TE59 1207 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 ZBP1Q9H171 429 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 CUEDC2Q9H467 287 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 PTPRHQ9HD43 1115 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 SEL1LQ9UBV2 794 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 TBX20Q9UMR3 447 aa15.64■□□□□ 0.09
BRCA1-218ENST00000489037 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.63■□□□□ 0.09
BRCA1-218ENST00000489037 C2orf71A6NGG8 1288 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 HIDE1A8MVS5 230 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 LINC01565O15544 149 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 B4GALT3O60512 393 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 TADA2AO75478 443 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 BRD1O95696 1058 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 IDEP14735 1019 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 OSTNP61366 133 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 KRT85P78386 507 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 KYAT1Q16773 422 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 KIAA1841Q6NSI8 718 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 GSTCDQ8NEC7 633 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.63■□□□□ 0.09
BRCA1-218ENST00000489037 KCNN1Q92952 543 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 UHRF1Q96T88 793 aaPredicted RBP15.63■□□□□ 0.09
BRCA1-218ENST00000489037 PYM1Q9BRP8 204 aaKnown RBP15.63■□□□□ 0.09
BRCA1-218ENST00000489037 EMILIN2Q9BXX0 1053 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 MRPL17Q9NRX2 175 aaKnown RBP15.63■□□□□ 0.09
BRCA1-218ENST00000489037 CD207Q9UJ71 328 aa15.63■□□□□ 0.09
BRCA1-218ENST00000489037 UNC80Q8N2C7 3258 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 MYMKA6NI61 221 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 HNRNPDLO14979 420 aaKnown RBP15.62■□□□□ 0.09
BRCA1-218ENST00000489037 SOD2P04179 222 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 URODP06132 367 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 PROZP22891 400 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 CCDC65Q8IXS2 484 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 BCL7CQ8WUZ0 217 aaPredicted RBP15.62■□□□□ 0.09
BRCA1-218ENST00000489037 DHX58Q96C10 678 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 ZBTB45Q96K62 511 aaPredicted RBP15.62■□□□□ 0.09
BRCA1-218ENST00000489037 SPATA32Q96LK8 384 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 TNMDQ9H2S6 317 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 MRPL44Q9H9J2 332 aaKnown RBP15.62■□□□□ 0.09
BRCA1-218ENST00000489037 SLC38A7Q9NVC3 462 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 RCOR1Q9UKL0 485 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 PCDHA7Q9UN72 937 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 IRAK3Q9Y616 596 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 CUL9Q8IWT3 2517 aa15.62■□□□□ 0.09
BRCA1-218ENST00000489037 A0A087X0B3 334 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 GRXCR2A6NFK2 248 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 CASTOR2A6NHX0 329 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 PTGESO14684 152 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 NMT1P30419 496 aaKnown RBP15.61■□□□□ 0.09
BRCA1-218ENST00000489037 LTBRP36941 435 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 GTF2BQ00403 316 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 MCL1Q07820 350 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 HSP90AA2PQ14568 343 aaPredicted RBP15.61■□□□□ 0.09
BRCA1-218ENST00000489037 CLUL1Q15846 466 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 HERC4Q5GLZ8 1057 aaPredicted RBP15.61■□□□□ 0.09
BRCA1-218ENST00000489037 LLGL2Q6P1M3 1020 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 SHC4Q6S5L8 630 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 PPFIBP1Q86W92 1011 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 SFR1Q86XK3 245 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 CEP120Q8N960 986 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 CASP10Q92851 521 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 HVCN1Q96D96 273 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 UROC1Q96N76 676 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 HERC2P3Q9BVR0 1158 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 ST6GALNAC4Q9H4F1 302 aa15.61■□□□□ 0.09
BRCA1-218ENST00000489037 MAGEF1Q9HAY2 307 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms