RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 CDC42EP1Q00587 391 aa11.86□□□□□ -0.51
COL21A1-211ENST00000488912 TAF2Q6P1X5 1199 aa11.86□□□□□ -0.51
COL21A1-211ENST00000488912 TRIM65Q6PJ69 517 aa11.86□□□□□ -0.51
COL21A1-211ENST00000488912 SESTD1Q86VW0 696 aa11.86□□□□□ -0.51
COL21A1-211ENST00000488912 TMEM40Q8WWA1 233 aa11.86□□□□□ -0.51
COL21A1-211ENST00000488912 FAM84AQ96KN4 292 aa11.86□□□□□ -0.51
COL21A1-211ENST00000488912 GCOM2Q9BZD3 368 aaPredicted RBP11.86□□□□□ -0.51
COL21A1-211ENST00000488912 TMEM117Q9H0C3 514 aa11.86□□□□□ -0.51
COL21A1-211ENST00000488912 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL21A1-211ENST00000488912 CDT1Q9H211 546 aa11.86□□□□□ -0.51
COL21A1-211ENST00000488912 GANQ9H2C0 597 aa11.86□□□□□ -0.51
COL21A1-211ENST00000488912 PDZD7Q9H5P4 517 aa11.86□□□□□ -0.51
COL21A1-211ENST00000488912 SIX2Q9NPC8 291 aa11.86□□□□□ -0.51
COL21A1-211ENST00000488912 NLRC4Q9NPP4 1024 aa11.86□□□□□ -0.51
COL21A1-211ENST00000488912 OGTO15294 1046 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 NRDCO43847 1150 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 DARSP14868 501 aaKnown RBP11.85□□□□□ -0.51
COL21A1-211ENST00000488912 MXI1P50539 228 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 POLR2FP61218 127 aaKnown RBP11.85□□□□□ -0.51
COL21A1-211ENST00000488912 PSMD6Q15008 389 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 USP37Q86T82 979 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 CEP120Q8N960 986 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 OR8K1Q8NGG5 319 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 BAP1Q92560 729 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 WNT8BQ93098 351 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 UNC93B1Q9H1C4 597 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 PDE11AQ9HCR9 933 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 PLCB1Q9NQ66 1216 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 CEP72Q9P209 647 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 CITO14578 2027 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 PTPRJQ12913 1337 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 STX10O60499 249 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 N4BP1O75113 896 aaKnown RBP11.85□□□□□ -0.51
COL21A1-211ENST00000488912 MYCP01106 439 aaPredicted RBP11.85□□□□□ -0.51
COL21A1-211ENST00000488912 FECHP22830 423 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 SNX17Q15036 470 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 KLHDC7AQ5VTJ3 777 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 LMBRD2Q68DH5 695 aaPredicted RBP11.85□□□□□ -0.51
COL21A1-211ENST00000488912 CACNA2D4Q7Z3S7 1137 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 SERINC5Q86VE9 423 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 THNSL1Q8IYQ7 743 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 DNAJC5GQ8N7S2 189 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 ZNF397Q8NF99 534 aaPredicted RBP11.85□□□□□ -0.51
COL21A1-211ENST00000488912 VTI1AQ96AJ9 217 aa11.85□□□□□ -0.51
COL21A1-211ENST00000488912 MOXD2PA6NHM9 499 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 SOWAHDA6NJG2 315 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 LRRC53A6NM62 1247 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 LRRN2O75325 713 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 CABYRO75952 493 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 UCHL3P15374 230 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 EIF4BP23588 611 aaKnown RBP11.84□□□□□ -0.51
COL21A1-211ENST00000488912 OSTNP61366 133 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 CLDN10P78369 228 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 ENPEPQ07075 957 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 ITGA7Q13683 1181 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 SLC9C1Q4G0N8 1177 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 E4F1Q66K89 784 aaPredicted RBP11.84□□□□□ -0.51
COL21A1-211ENST00000488912 WDR59Q6PJI9 974 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 RRAGAQ7L523 313 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 BRSK2Q8IWQ3 736 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 NME8Q8N427 588 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 LMO3Q8TAP4 145 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 FNBP1Q96RU3 617 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 ARID3AQ99856 593 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 INTS2Q9H0H0 1204 aaKnown RBP11.84□□□□□ -0.51
COL21A1-211ENST00000488912 TMEM8AQ9HCN3 771 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 AJAP1Q9UKB5 411 aaPredicted RBP11.84□□□□□ -0.51
COL21A1-211ENST00000488912 CPSF3Q9UKF6 684 aaKnown RBP11.84□□□□□ -0.51
COL21A1-211ENST00000488912 FHOD1Q9Y613 1164 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 TRIP11Q15643 1979 aa11.84□□□□□ -0.51
COL21A1-211ENST00000488912 A0A1B0GUA9 196 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 P4HA2O15460 535 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 ARHGAP6O43182 974 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 HOXA11P31270 313 aaPredicted RBP11.83□□□□□ -0.51
COL21A1-211ENST00000488912 MTF1Q14872 753 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 MTFR1Q15390 333 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 PTGISQ16647 500 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 EPC2Q52LR7 807 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 KRT39Q6A163 491 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 GJB7Q6PEY0 223 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 CATSPER4Q7RTX7 472 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 GPIHBP1Q8IV16 184 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 TMEM192Q8IY95 271 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 ZNF516Q92618 1163 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 GLT1D1Q96MS3 346 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 TSEN34Q9BSV6 310 aaKnown RBP11.83□□□□□ -0.51
COL21A1-211ENST00000488912 NAA15Q9BXJ9 866 aaKnown RBP11.83□□□□□ -0.51
COL21A1-211ENST00000488912 EDEM3Q9BZQ6 932 aa11.83□□□□□ -0.51
COL21A1-211ENST00000488912 A0A1W2PQ45 241 aaPredicted RBP11.83□□□□□ -0.52
COL21A1-211ENST00000488912 A0A1W2PQY0 241 aa11.83□□□□□ -0.52
COL21A1-211ENST00000488912 PMM2O15305 246 aa11.83□□□□□ -0.52
COL21A1-211ENST00000488912 CTSHP09668 335 aa11.83□□□□□ -0.52
COL21A1-211ENST00000488912 MCF2P10911 925 aa11.83□□□□□ -0.52
COL21A1-211ENST00000488912 TNNI1P19237 187 aa11.83□□□□□ -0.52
COL21A1-211ENST00000488912 GTF2H1P32780 548 aa11.83□□□□□ -0.52
COL21A1-211ENST00000488912 CRYBB1P53674 252 aaPredicted RBP11.83□□□□□ -0.52
COL21A1-211ENST00000488912 MRPS6P82932 125 aaKnown RBP11.83□□□□□ -0.52
COL21A1-211ENST00000488912 CETN1Q12798 172 aa11.83□□□□□ -0.52
COL21A1-211ENST00000488912 PDXDC1Q6P996 788 aa11.83□□□□□ -0.52
COL21A1-211ENST00000488912 SV2AQ7L0J3 742 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms