RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ZPBP2Q6X784 338 aa21.11■□□□□ 0.97
CCM2-216ENST00000488727 SLC24A5Q71RS6 500 aa21.11■□□□□ 0.97
CCM2-216ENST00000488727 TMCO2Q7Z6W1 182 aaPredicted RBP21.11■□□□□ 0.97
CCM2-216ENST00000488727 SMYD4Q8IYR2 804 aaPredicted RBP21.11■□□□□ 0.97
CCM2-216ENST00000488727 ZNF507Q8TCN5 953 aa21.11■□□□□ 0.97
CCM2-216ENST00000488727 ZBTB45Q96K62 511 aaPredicted RBP21.11■□□□□ 0.97
CCM2-216ENST00000488727 ACCSQ96QU6 501 aa21.11■□□□□ 0.97
CCM2-216ENST00000488727 N4BP3O15049 544 aa21.1■□□□□ 0.97
CCM2-216ENST00000488727 ARHGAP6O43182 974 aa21.1■□□□□ 0.97
CCM2-216ENST00000488727 PROZP22891 400 aa21.1■□□□□ 0.97
CCM2-216ENST00000488727 STX17P56962 302 aa21.1■□□□□ 0.97
CCM2-216ENST00000488727 SLC27A1Q6PCB7 646 aa21.1■□□□□ 0.97
CCM2-216ENST00000488727 STXBP4Q6ZWJ1 553 aa21.1■□□□□ 0.97
CCM2-216ENST00000488727 CRIPAKQ8N1N5 446 aa21.1■□□□□ 0.97
CCM2-216ENST00000488727 CCDC51Q96ER9 411 aa21.1■□□□□ 0.97
CCM2-216ENST00000488727 BICD1Q96G01 975 aa21.1■□□□□ 0.97
CCM2-216ENST00000488727 RNPC3Q96LT9 517 aaKnown RBP21.1■□□□□ 0.97
CCM2-216ENST00000488727 HAPLN2Q9GZV7 340 aa21.1■□□□□ 0.97
CCM2-216ENST00000488727 C1orf112Q9NSG2 853 aa21.1■□□□□ 0.97
CCM2-216ENST00000488727 FAM105AQ9NUU6 356 aa21.1■□□□□ 0.97
CCM2-216ENST00000488727 LIMA1Q9UHB6 759 aaKnown RBP21.1■□□□□ 0.97
CCM2-216ENST00000488727 LAMA3Q16787 3333 aa21.1■□□□□ 0.97
CCM2-216ENST00000488727 A0A0U1RQF3 1178 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 ANKRD63C9JTQ0 380 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 ATF7P17544 494 aaPredicted RBP21.09■□□□□ 0.97
CCM2-216ENST00000488727 LIG4P49917 911 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 FAM189BP81408 668 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 BMT2Q1RMZ1 405 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 NELFCDQ8IXH7 590 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 MYOCDQ8IZQ8 938 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 TC2NQ8N9U0 490 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 UBE4BO95155 1302 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 ITIH6Q6UXX5 1313 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 TOM1L1O75674 476 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 NPTXRO95502 500 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 IBSPP21815 317 aaPredicted RBP21.09■□□□□ 0.97
CCM2-216ENST00000488727 FILIP1LQ4L180 1135 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 ECHDC2Q86YB7 292 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 SMG8Q8ND04 991 aaKnown RBP21.09■□□□□ 0.97
CCM2-216ENST00000488727 GTPBP4Q9BZE4 634 aaKnown RBP21.09■□□□□ 0.97
CCM2-216ENST00000488727 CDT1Q9H211 546 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 ANKFY1Q9P2R3 1169 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 MAPK8IP1Q9UQF2 711 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 PCDHB2Q9Y5E7 798 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 SLC4A7Q9Y6M7 1214 aa21.09■□□□□ 0.97
CCM2-216ENST00000488727 LRRC10BA6NIK2 292 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 STX10O60499 249 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 AMHP03971 560 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 HSP90AA2PQ14568 343 aaPredicted RBP21.08■□□□□ 0.97
CCM2-216ENST00000488727 ZNF568Q3ZCX4 644 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 PRPF38BQ5VTL8 546 aaKnown RBP21.08■□□□□ 0.97
CCM2-216ENST00000488727 MPZL3Q6UWV2 235 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 TDHQ8IZJ6 230 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 SYCP3Q8IZU3 236 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 ADSSL1Q8N142 457 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 KIF18AQ8NI77 898 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 NELFBQ8WX92 580 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 PDCL3Q9H2J4 239 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 MTIF3Q9H2K0 278 aaKnown RBP21.08■□□□□ 0.97
CCM2-216ENST00000488727 TMEM206Q9H813 350 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 EXOC7Q9UPT5 735 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 HES2Q9Y543 173 aa21.08■□□□□ 0.97
CCM2-216ENST00000488727 GBF1Q92538 1859 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 ZNF623O75123 536 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 RAB27AP51159 221 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 RBM10P98175 930 aaKnown RBP21.07■□□□□ 0.96
CCM2-216ENST00000488727 ZBTB33Q86T24 672 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 ZNF598Q86UK7 904 aaKnown RBP21.07■□□□□ 0.96
CCM2-216ENST00000488727 TOP1MTQ969P6 601 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 ADPGKQ9BRR6 497 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 NXF3Q9H4D5 531 aaKnown RBP21.07■□□□□ 0.96
CCM2-216ENST00000488727 IPPQ9Y573 584 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 COL4A6Q14031 1691 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 MEIS3P2A8K0S8 358 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 TGFB1I1O43294 461 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 UPP2O95045 317 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 ADSSP30520 456 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 PRCPP42785 496 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 KNOP1Q1ED39 458 aaKnown RBP21.07■□□□□ 0.96
CCM2-216ENST00000488727 FAM109BQ6ICB4 259 aaPredicted RBP21.07■□□□□ 0.96
CCM2-216ENST00000488727 PANX2Q96RD6 677 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 BAG1Q99933 345 aaPredicted RBP21.07■□□□□ 0.96
CCM2-216ENST00000488727 TCHPQ9BT92 498 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 TRIM6Q9C030 488 aaPredicted RBP21.07■□□□□ 0.96
CCM2-216ENST00000488727 STYXL1Q9Y6J8 313 aa21.07■□□□□ 0.96
CCM2-216ENST00000488727 CLDN3O15551 220 aa21.06■□□□□ 0.96
CCM2-216ENST00000488727 MCL1Q07820 350 aa21.06■□□□□ 0.96
CCM2-216ENST00000488727 DCAF4L1Q3SXM0 396 aa21.06■□□□□ 0.96
CCM2-216ENST00000488727 MRPL10Q7Z7H8 261 aaKnown RBP21.06■□□□□ 0.96
CCM2-216ENST00000488727 GUF1Q8N442 669 aaKnown RBP21.06■□□□□ 0.96
CCM2-216ENST00000488727 CEP120Q8N960 986 aa21.06■□□□□ 0.96
CCM2-216ENST00000488727 LPPQ93052 612 aa21.06■□□□□ 0.96
CCM2-216ENST00000488727 SLC9A7Q96T83 725 aa21.06■□□□□ 0.96
CCM2-216ENST00000488727 GBP3Q9H0R5 595 aa21.06■□□□□ 0.96
CCM2-216ENST00000488727 RNF39Q9H2S5 420 aa21.06■□□□□ 0.96
CCM2-216ENST00000488727 KCTD10Q9H3F6 313 aa21.06■□□□□ 0.96
CCM2-216ENST00000488727 ELAC1Q9H777 363 aaKnown RBP21.06■□□□□ 0.96
CCM2-216ENST00000488727 TMEM161AQ9NX61 479 aa21.06■□□□□ 0.96
CCM2-216ENST00000488727 COLQQ9Y215 455 aaPredicted RBP21.06■□□□□ 0.96
CCM2-216ENST00000488727 TEX33O43247 280 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms