RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 NT5C1B-RDH14C9J2C7 533 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 PTGESO14684 152 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 HNRNPDLO14979 420 aaKnown RBP17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 GALTP07902 379 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 HARSP12081 509 aaKnown RBP17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 CASP1P29466 404 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 IRS1P35568 1242 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 ALDH7A1P49419 539 aaKnown RBP17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 CASP5P51878 434 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 ASIC1P78348 528 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 PLCB3Q01970 1234 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 UBE3AQ05086 875 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 GRIK3Q13003 919 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 COASYQ13057 564 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 SLC39A4Q6P5W5 647 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 ZNF720Q7Z2F6 126 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 FSIP1Q8NA03 581 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 HVCN1Q96D96 273 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 RPS6KC1Q96S38 1066 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 C7orf25Q9BPX7 421 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 TCHPQ9BT92 498 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 HAPLN2Q9GZV7 340 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 GOLPH3LQ9H4A5 285 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 MRPL44Q9H9J2 332 aaKnown RBP17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 PANK4Q9NVE7 773 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 SPG21Q9NZD8 308 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 SERTAD1Q9UHV2 236 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 XIRP2A4UGR9 3374 aa17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 TCF20Q9UGU0 1960 aaKnown RBP17.53■□□□□ 0.4
ERGIC3-216ENST00000488384 SLFN14P0C7P3 912 aa17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 ABCD1P33897 745 aa17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 LIG4P49917 911 aa17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 NDUFA8P51970 172 aa17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 AMPD3Q01432 767 aa17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 MCL1Q07820 350 aa17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 HERC4Q5GLZ8 1057 aaPredicted RBP17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 CCDC65Q8IXS2 484 aa17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 COLGALT2Q8IYK4 626 aa17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 GRAMD1CQ8IYS0 662 aa17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 MRPS27Q92552 414 aaKnown RBP17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 FAM193BQ96PV7 902 aaPredicted RBP17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 TMEM175Q9BSA9 504 aa17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 NSUN3Q9H649 340 aaKnown RBP17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 LZTS1Q9Y250 596 aa17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 PCDHGC5Q9Y5F6 944 aa17.52■□□□□ 0.4
ERGIC3-216ENST00000488384 CARNS1A5YM72 827 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 CLDN3O15551 220 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 MEFVO15553 781 aaPredicted RBP17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 GCNT3O95395 438 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 MYBP10242 640 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 AFMP43652 599 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 OSTNP61366 133 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 TPRNQ4KMQ1 711 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 TCEAL5Q5H9L2 206 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 TJAP1Q5JTD0 557 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 CEP57L1Q8IYX8 460 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 HPS3Q969F9 1004 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 TMEM169Q96HH4 297 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 IGSF21Q96ID5 467 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 SNX27Q96L92 541 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 CCDC94Q9BW85 323 aaPredicted RBP17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 BLZF1Q9H2G9 400 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 IKZF4Q9H2S9 585 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 TLR9Q9NR96 1032 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 MARCH5Q9NX47 278 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 THEGQ9P2T0 379 aa17.51■□□□□ 0.39
ERGIC3-216ENST00000488384 BRWD1Q9NSI6 2320 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 TISP43B9A030 160 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 FSCN2O14926 492 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 FAM189A1O60320 539 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 SYKP43405 635 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 ERVFC1P60507 584 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 KCNA1Q09470 495 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 CUL4BQ13620 913 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 NAB2Q15742 525 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 SEZ6Q53EL9 994 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 GLRA4Q5JXX5 417 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 L1TD1Q5T7N2 865 aaKnown RBP17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 GLIS3Q8NEA6 775 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 PAGE5Q96GU1 130 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 VN1R3Q9BXE9 311 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 USP25Q9UHP3 1055 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 PRG3Q9Y2Y8 225 aaPredicted RBP17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 CITO14578 2027 aa17.5■□□□□ 0.39
ERGIC3-216ENST00000488384 TRIP11Q15643 1979 aa17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 ANKRD63C9JTQ0 380 aa17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 F8W810 466 aa17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 NRP1O14786 923 aa17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 YARSP54577 528 aaKnown RBP17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 KRT17Q04695 432 aa17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 EHHADHQ08426 723 aa17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 ALCAMQ13740 583 aa17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 SKIV2LQ15477 1246 aaKnown RBP17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 XKR4Q5GH76 650 aa17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 ZBTB41Q5SVQ8 909 aa17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 ALKAL1Q6UXT8 129 aa17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 UNC13DQ70J99 1090 aa17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 ADGRD2Q7Z7M1 963 aa17.49■□□□□ 0.39
ERGIC3-216ENST00000488384 ATXN2LQ8WWM7 1075 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms