RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 MFAP3LO75121 409 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 ZNF623O75123 536 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 GPR32O75388 356 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 PARNO95453 639 aaKnown RBP5□□□□□ -1.61
ECHDC1-217ENST00000488087 POU2F2P09086 479 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 U2AF1L5P0DN76 240 aaPredicted RBP5□□□□□ -1.61
ECHDC1-217ENST00000488087 IL2RBP14784 551 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 HSPA6P17066 643 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 EDNRBP24530 442 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 U2AF1Q01081 240 aaKnown RBP eCLIP5□□□□□ -1.61
ECHDC1-217ENST00000488087 FAM102BQ5T8I3 360 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 ZNF572Q7Z3I7 529 aaPredicted RBP5□□□□□ -1.61
ECHDC1-217ENST00000488087 SGMS1Q86VZ5 419 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 DRC7Q8IY82 874 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 ELOA2Q8IYF1 753 aaPredicted RBP5□□□□□ -1.61
ECHDC1-217ENST00000488087 GRAMD1CQ8IYS0 662 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 MYO1HQ8N1T3 1032 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 CLIP3Q96DZ5 547 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 MPHOSPH9Q99550 1183 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 MAP3K14Q99558 947 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 CPPED1Q9BRF8 314 aaPredicted RBP5□□□□□ -1.61
ECHDC1-217ENST00000488087 SSBP3Q9BWW4 388 aaPredicted RBP5□□□□□ -1.61
ECHDC1-217ENST00000488087 PCGF6Q9BYE7 350 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 GTPBP4Q9BZE4 634 aaKnown RBP5□□□□□ -1.61
ECHDC1-217ENST00000488087 ENKD1Q9H0I2 346 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 DEF6Q9H4E7 631 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 NMRK2Q9NPI5 230 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 MOCS1Q9NZB8 636 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 SH3BP1Q9Y3L3 701 aa5□□□□□ -1.61
ECHDC1-217ENST00000488087 MYBBP1AQ9BQG0 1328 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 CAPN14A8MX76 684 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 PATE3B3GLJ2 98 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 AP1G1O43747 822 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 FOXD2O60548 495 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 IPO13O94829 963 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 RAP2AP10114 183 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 SYN1P17600 705 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 DDCP20711 480 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 FLT3LGP49771 235 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 CDC42EP1Q00587 391 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 PTH1RQ03431 593 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 GTF2H3Q13889 308 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 ICAM4Q14773 271 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 MLC1Q15049 377 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 PGS1Q32NB8 556 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 AFMIDQ63HM1 303 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 CXorf57Q6NSI4 855 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 USP45Q70EL2 814 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 XYLT1Q86Y38 959 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 ANKRD35Q8N283 1001 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 MB21D1Q8N884 522 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 Q8TCH9 128 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 CEP95Q96GE4 821 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 FAM89AQ96GI7 184 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 TMX3Q96JJ7 454 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 AIFM3Q96NN9 605 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 CHPF2Q9P2E5 772 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 ST6GALNAC2Q9UJ37 374 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 JAG2Q9Y219 1238 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 RUVBL1Q9Y265 456 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 TCAF1Q9Y4C2 921 aa4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 CFAP20Q9Y6A4 193 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-217ENST00000488087 PRR5-ARHGAP8B1AHC4 643 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 B5MCH6 92 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 PRPF3O43395 683 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 SGTAO43765 313 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 MARCH6O60337 910 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 AMY1AP04745 511 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 ALOX15P16050 662 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 ATF3P18847 181 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 ACO1P21399 889 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 FPR1P21462 350 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 GUCY1A2P33402 732 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 SP140Q13342 867 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 ZNF267Q14586 743 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 ATP2B3Q16720 1220 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 CCDC157Q569K6 752 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 FAM47AQ5JRC9 791 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 MFSD14BQ5SR56 506 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 ZNF585AQ6P3V2 769 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 GADL1Q6ZQY3 521 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 APBB1IPQ7Z5R6 666 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 TTC7BQ86TV6 843 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 FAM83AQ86UY5 434 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 GSPT2Q8IYD1 628 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 TCEAL8Q8IYN2 117 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 ZGPATQ8N5A5 531 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 MAGEB6Q8N7X4 407 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 DNERQ8NFT8 737 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 ST8SIA2Q92186 375 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 MIEF2Q96C03 454 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 MVB12AQ96EY5 273 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 BORCS6Q96GS4 357 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 CLPTM1LQ96KA5 538 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 SAMD11Q96NU1 681 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 SPON1Q9HCB6 807 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 SMPD4Q9NXE4 827 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 ACTL7AQ9Y615 435 aa4.98□□□□□ -1.61
ECHDC1-217ENST00000488087 NISCHQ9Y2I1 1504 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms