RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 RPF1Q9H9Y2 349 aaKnown RBP12.02□□□□□ -0.49
HDLBP-242ENST00000488013 SAMSN1Q9NSI8 373 aaKnown RBP12.02□□□□□ -0.49
HDLBP-242ENST00000488013 LIMA1Q9UHB6 759 aaKnown RBP12.02□□□□□ -0.49
HDLBP-242ENST00000488013 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.02□□□□□ -0.49
HDLBP-242ENST00000488013 A0A0U1RQF3 1178 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 ABLIM1O14639 778 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 N4BP1O75113 896 aaKnown RBP12.01□□□□□ -0.49
HDLBP-242ENST00000488013 CSDE1O75534 798 aaKnown RBP12.01□□□□□ -0.49
HDLBP-242ENST00000488013 EOMESO95936 686 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 CD52P31358 61 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 MAN2A1Q16706 1144 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 PLEKHG4Q58EX7 1191 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 MFSD5Q6N075 450 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 SLC24A5Q71RS6 500 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 MFSD14AQ96MC6 490 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 FNBP1Q96RU3 617 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 FAM213AQ9BRX8 229 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 TUBGCP2Q9BSJ2 902 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 PCIF1Q9H4Z3 704 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 AGO3Q9H9G7 860 aaKnown RBP12.01□□□□□ -0.49
HDLBP-242ENST00000488013 GRPEL1Q9HAV7 217 aa12.01□□□□□ -0.49
HDLBP-242ENST00000488013 RBAKQ9NYW8 714 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-242ENST00000488013 CCDC85CA6NKD9 419 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 P4HA2O15460 535 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 STAG3L1P0CL83 205 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 ACTN1P12814 892 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 VAMP7P51809 220 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 BFSP1Q12934 665 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 PSMD6Q15008 389 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 FKBP15Q5T1M5 1219 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 ZBTB33Q86T24 672 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 IRF2BP1Q8IU81 584 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 CREBRFQ8IUR6 639 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 BRSK2Q8IWQ3 736 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 TRIM59Q8IWR1 403 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 CPB2Q96IY4 423 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 PPP1R12CQ9BZL4 782 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 PRDM5Q9NQX1 630 aaPredicted RBP12□□□□□ -0.49
HDLBP-242ENST00000488013 RGS18Q9NS28 235 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 FAM105AQ9NUU6 356 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 CPSF3Q9UKF6 684 aaKnown RBP12□□□□□ -0.49
HDLBP-242ENST00000488013 DERAQ9Y315 318 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 PCDHB2Q9Y5E7 798 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 NR2E3Q9Y5X4 410 aa12□□□□□ -0.49
HDLBP-242ENST00000488013 KIAA0100Q14667 2235 aaKnown RBP12□□□□□ -0.49
HDLBP-242ENST00000488013 ABHD14A-ACY1A0A1B0GW23 586 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 TTLL13PA6NNM8 815 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 TISP43B9A030 160 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 PMM2O15305 246 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 HOXA2O43364 376 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 XPOTO43592 962 aaKnown RBP11.99□□□□□ -0.49
HDLBP-242ENST00000488013 EVI5O60447 810 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 NBNO60934 754 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 NPTXRO95502 500 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 HARSP12081 509 aaKnown RBP11.99□□□□□ -0.49
HDLBP-242ENST00000488013 FGFR4P22455 802 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 UBASH3AP57075 661 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 CLDN10P78369 228 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 FANCCQ00597 558 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 CYP24A1Q07973 514 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 PPIGQ13427 754 aaKnown RBP eCLIP11.99□□□□□ -0.49
HDLBP-242ENST00000488013 IKBKEQ14164 716 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 DSC3Q14574 896 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 MBTPS1Q14703 1052 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 VWA3BQ502W6 1294 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 EEF1DP3Q658K8 133 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 CNKSR3Q6P9H4 555 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 MRPL10Q7Z7H8 261 aaKnown RBP11.99□□□□□ -0.49
HDLBP-242ENST00000488013 CBWD2Q8IUF1 395 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 THNSL1Q8IYQ7 743 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 CACTINQ8WUQ7 758 aaKnown RBP11.99□□□□□ -0.49
HDLBP-242ENST00000488013 IQCDQ96DY2 449 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 SAAL1Q96ER3 474 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 BORCS6Q96GS4 357 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 ZBTB45Q96K62 511 aaPredicted RBP11.99□□□□□ -0.49
HDLBP-242ENST00000488013 ADAM2Q99965 735 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 HSD3B7Q9H2F3 369 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 ELAC1Q9H777 363 aaKnown RBP11.99□□□□□ -0.49
HDLBP-242ENST00000488013 GIT1Q9Y2X7 761 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 C2CD2Q9Y426 696 aa11.99□□□□□ -0.49
HDLBP-242ENST00000488013 A0A1B0GTH6 734 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 GTPBP10A4D1E9 387 aaKnown RBP11.98□□□□□ -0.49
HDLBP-242ENST00000488013 LGALS16A8MUM7 142 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 FAM189A1O60320 539 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 BAIAP3O94812 1187 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 AFPP02771 609 aaKnown RBP11.98□□□□□ -0.49
HDLBP-242ENST00000488013 EDN1P05305 212 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 ADRB2P07550 413 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 ITGA4P13612 1032 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 CYP2C18P33260 490 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 CASP4P49662 377 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 ACOT2P49753 483 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 COPB1P53618 953 aaKnown RBP11.98□□□□□ -0.49
HDLBP-242ENST00000488013 CCL23P55773 120 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 FAM189BP81408 668 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 KRT31Q15323 416 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 DUOXA2Q1HG44 320 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 SMYD5Q6GMV2 418 aa11.98□□□□□ -0.49
HDLBP-242ENST00000488013 WDR49Q8IV35 697 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms