RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 DEPTORQ8TB45 409 aa12.37□□□□□ -0.43
RAB11FIP3-210ENST00000487899 LRRC15Q8TF66 581 aa12.37□□□□□ -0.43
RAB11FIP3-210ENST00000487899 ASIC4Q96FT7 647 aa12.37□□□□□ -0.43
RAB11FIP3-210ENST00000487899 PNMA5Q96PV4 448 aa12.37□□□□□ -0.43
RAB11FIP3-210ENST00000487899 EMILIN2Q9BXX0 1053 aa12.37□□□□□ -0.43
RAB11FIP3-210ENST00000487899 MAN1C1Q9NR34 630 aa12.37□□□□□ -0.43
RAB11FIP3-210ENST00000487899 TSHZ2Q9NRE2 1034 aa12.37□□□□□ -0.43
RAB11FIP3-210ENST00000487899 CHST7Q9NS84 486 aa12.37□□□□□ -0.43
RAB11FIP3-210ENST00000487899 SNTG2Q9NY99 539 aa12.37□□□□□ -0.43
RAB11FIP3-210ENST00000487899 ARHGAP28Q9P2N2 729 aa12.37□□□□□ -0.43
RAB11FIP3-210ENST00000487899 ADAM28Q9UKQ2 775 aa12.37□□□□□ -0.43
RAB11FIP3-210ENST00000487899 TMEM221A6NGB7 291 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 CASTOR2A6NHX0 329 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 M0R296 226 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 ABLIM1O14639 778 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 HIP1RO75146 1068 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 PAPLNO95428 1278 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 LIG1P18858 919 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 NPTX2P47972 431 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 EFNA5P52803 228 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 HSP90AA2PQ14568 343 aaPredicted RBP12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 DCAF4L1Q3SXM0 396 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 RTP2Q5QGT7 225 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 KRT79Q5XKE5 535 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 DTHD1Q6ZMT9 781 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 TRIM67Q6ZTA4 783 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 CABP7Q86V35 215 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 CEP120Q8N960 986 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 HASPINQ8TF76 798 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 RIPOR3Q96MK2 946 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 SMOC2Q9H3U7 446 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 RXFP1Q9HBX9 757 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 PARP2Q9UGN5 583 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 NR2E1Q9Y466 385 aa12.36□□□□□ -0.43
RAB11FIP3-210ENST00000487899 MIA3Q5JRA6 1907 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 COL4A2P08572 1712 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 ADH1AP07327 375 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 KLRC2P26717 231 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 PEX3P56589 373 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 SIGLEC14Q08ET2 396 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 TMEM119Q4V9L6 283 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 ATF7IP2Q5U623 682 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 RINT1Q6NUQ1 792 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 C15orf39Q6ZRI6 1047 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 C1orf186Q6ZWK4 172 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 BMP8AQ7Z5Y6 402 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 GPR149Q86SP6 731 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 TDRD5Q8NAT2 981 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 IFT74Q96LB3 600 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 PPP1R10Q96QC0 940 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 ADPGKQ9BRR6 497 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 CDT1Q9H211 546 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 UPF2Q9HAU5 1272 aaKnown RBP12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 GDAQ9Y2T3 454 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 STK24Q9Y6E0 443 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 CFAP54Q96N23 3096 aa12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 SF3B1O75533 1304 aaKnown RBP eCLIP12.35□□□□□ -0.43
RAB11FIP3-210ENST00000487899 PATJQ8NI35 1801 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 FRYLO94915 3013 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 VWA3AA6NCI4 1184 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 H3BQV1 296 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 MEFVO15553 781 aaPredicted RBP12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 BRD1O95696 1058 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 GLUD1P00367 558 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 RPL17P18621 184 aaKnown RBP12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 PROZP22891 400 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 IGFBP6P24592 240 aaPredicted RBP12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 GUCY2CP25092 1073 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 MCM2P49736 904 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 SLC12A3P55017 1021 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 DMP1Q13316 513 aaPredicted RBP12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 TMEM132AQ24JP5 1023 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 GLRA4Q5JXX5 417 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 ARL6IP4Q66PJ3 421 aaKnown RBP12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 TMEM87AQ8NBN3 555 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 KREMEN2Q8NCW0 462 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 CMASQ8NFW8 434 aaPredicted RBP12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 DRC1Q96MC2 740 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 COLEC11Q9BWP8 271 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 PTPRHQ9HD43 1115 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 DNM3Q9UQ16 869 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 SMC3Q9UQE7 1217 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 TNFSF13BQ9Y275 285 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 USTQ9Y2C2 406 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 COL4A3Q01955 1670 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 OBSL1O75147 1896 aa12.34□□□□□ -0.43
RAB11FIP3-210ENST00000487899 SCN1AP35498 2009 aa12.33□□□□□ -0.43
RAB11FIP3-210ENST00000487899 CACNA1HO95180 2353 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CCDC169A6NNP5 214 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 TGM5O43548 720 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 N4BP1O75113 896 aaKnown RBP12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 NR1I2O75469 434 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 RFPL2O75678 378 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 THP07101 528 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 ASGR2P07307 311 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 GRIN1Q05586 938 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 SOX4Q06945 474 aaPredicted RBP12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 RAD51AP2Q09MP3 1159 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 MTMR3Q13615 1198 aa12.33□□□□□ -0.44
RAB11FIP3-210ENST00000487899 CUL4AQ13619 759 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms