RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 LILRA2Q8N149 483 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 PRPF38AQ8NAV1 312 aaKnown RBP7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 USP7Q93009 1102 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 ORAI3Q9BRQ5 295 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 STAP2Q9UGK3 403 aa7.4□□□□□ -1.22
RTFDC1-209ENST00000487211 PSME4Q14997 1843 aa7.4□□□□□ -1.23
RTFDC1-209ENST00000487211 AKAP11Q9UKA4 1901 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 GAKO14976 1311 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 TCP10L2B9ZVM9 353 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 GAS7O60861 476 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 IDH1O75874 414 aaKnown RBP7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 NTRK1P04629 796 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 PDE6AP16499 860 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 MX1P20591 662 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 BTDP43251 543 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 NAA16Q6N069 864 aaPredicted RBP7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 CABP7Q86V35 215 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 OSTM1Q86WC4 334 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 SKAP1Q86WV1 359 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 KIF18BQ86Y91 864 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 DZIP1Q86YF9 867 aaKnown RBP7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 RIOX2Q8IUF8 465 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 ZFPM1Q8IX07 1006 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 C2orf69Q8N8R5 385 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 CHST14Q8NCH0 376 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 DEFB129Q9H1M3 183 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 USP40Q9NVE5 1235 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 PAG1Q9NWQ8 432 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 ZKSCAN5Q9Y2L8 839 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 POLR2AP24928 1970 aaKnown RBP7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 CENPFP49454 3210 aa7.39□□□□□ -1.23
RTFDC1-209ENST00000487211 ADAMTSL1Q8N6G6 1762 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 ARAP2Q8WZ64 1704 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 MAST3O60307 1309 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 TTC41PQ6P2S7 1318 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 SCO2A0A1W2PP80 73 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 TCRBV5S4A2TA0A5A2 114 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 F2P00734 622 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 LDHCP07864 332 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 ARL4AP40617 200 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 RHBDL3P58872 404 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 DYNLL1P63167 89 aaKnown RBP7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 MAP3K12Q12852 859 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 SNX17Q15036 470 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 TTF1Q15361 905 aaPredicted RBP7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 GPR19Q15760 415 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 SLC9C2Q5TAH2 1124 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 OTOP3Q7RTS5 596 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 MAGEB6Q8N7X4 407 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 ABHD4Q8TB40 342 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 PIP4K2CQ8TBX8 421 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 TEPSINQ96N21 525 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 VEZTQ9HBM0 779 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 B4GALT6Q9UBX8 382 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 CHD8Q9HCK8 2581 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 PRUNE2Q8WUY3 3088 aa7.38□□□□□ -1.23
RTFDC1-209ENST00000487211 HTTP42858 3142 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 MROH7-TTC4A0A0A0MT08 1334 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 PTPDC1A2A3K4 754 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 ERC2O15083 957 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 NKRFO15226 690 aaKnown RBP eCLIP7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 WDHD1O75717 1129 aaPredicted RBP7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 CELF2O95319 508 aaKnown RBP7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 EYA4O95677 639 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 PNLIPP16233 465 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 ADD2P35612 726 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 MECP2P51608 486 aaKnown RBP7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 JAM2P57087 298 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 IL2P60568 153 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 GSTO1P78417 241 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 LACTBP83111 547 aaPredicted RBP7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 ARHGAP36Q6ZRI8 547 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 MOB2Q70IA6 237 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 ABI1Q8IZP0 508 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 MIGA1Q8NAN2 632 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 SH3RF3Q8TEJ3 882 aaPredicted RBP7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 SHISA4Q96DD7 197 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 CDCA5Q96FF9 252 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 CCDC136Q96JN2 1154 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 TTC1Q99614 292 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 TMEM39BQ9GZU3 492 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 CRTAC1Q9NQ79 661 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 DDX4Q9NQI0 724 aaKnown RBP7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 HOMER2Q9NSB8 354 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 AATFQ9NY61 560 aaKnown RBP eCLIP7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 FZD1Q9UP38 647 aa7.37□□□□□ -1.23
RTFDC1-209ENST00000487211 ZNF532Q9HCE3 1301 aa7.36□□□□□ -1.23
RTFDC1-209ENST00000487211 ZNF561-AS1K7EIQ3 104 aa7.36□□□□□ -1.23
RTFDC1-209ENST00000487211 KRIT1O00522 736 aa7.36□□□□□ -1.23
RTFDC1-209ENST00000487211 KCNK3O14649 394 aa7.36□□□□□ -1.23
RTFDC1-209ENST00000487211 KRT37O76014 449 aa7.36□□□□□ -1.23
RTFDC1-209ENST00000487211 AMY2AP04746 511 aa7.36□□□□□ -1.23
RTFDC1-209ENST00000487211 GLI4P10075 376 aa7.36□□□□□ -1.23
RTFDC1-209ENST00000487211 AMY2BP19961 511 aa7.36□□□□□ -1.23
RTFDC1-209ENST00000487211 AFMP43652 599 aa7.36□□□□□ -1.23
RTFDC1-209ENST00000487211 DSG1Q02413 1049 aa7.36□□□□□ -1.23
RTFDC1-209ENST00000487211 TCP10Q12799 353 aa7.36□□□□□ -1.23
RTFDC1-209ENST00000487211 UBE3CQ15386 1083 aa7.36□□□□□ -1.23
RTFDC1-209ENST00000487211 ARHGAP44Q17R89 818 aa7.36□□□□□ -1.23
RTFDC1-209ENST00000487211 FKBP1CQ5VVH2 108 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms