RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PPP2R5AQ15172 486 aa27.08■■□□□ 1.93
LIME1-206ENST00000487026 MCTP1Q6DN14 999 aa27.08■■□□□ 1.93
LIME1-206ENST00000487026 ALYREFQ86V81 257 aaKnown RBP27.08■■□□□ 1.93
LIME1-206ENST00000487026 GLYCTKQ8IVS8 523 aa27.08■■□□□ 1.93
LIME1-206ENST00000487026 HASPINQ8TF76 798 aa27.08■■□□□ 1.93
LIME1-206ENST00000487026 GDAQ9Y2T3 454 aa27.08■■□□□ 1.93
LIME1-206ENST00000487026 ZDBF2Q9HCK1 2354 aa27.07■■□□□ 1.92
LIME1-206ENST00000487026 RECQL4O94761 1208 aa27.07■■□□□ 1.92
LIME1-206ENST00000487026 GLUD1P00367 558 aa27.07■■□□□ 1.92
LIME1-206ENST00000487026 RPL17P18621 184 aaKnown RBP27.07■■□□□ 1.92
LIME1-206ENST00000487026 HSP90AA2PQ14568 343 aaPredicted RBP27.07■■□□□ 1.92
LIME1-206ENST00000487026 USP41Q3LFD5 358 aa27.07■■□□□ 1.92
LIME1-206ENST00000487026 NT5DC1Q5TFE4 455 aa27.07■■□□□ 1.92
LIME1-206ENST00000487026 ZDHHC14Q8IZN3 488 aa27.07■■□□□ 1.92
LIME1-206ENST00000487026 RIN2Q8WYP3 895 aaPredicted RBP27.07■■□□□ 1.92
LIME1-206ENST00000487026 KIFAP3Q92845 792 aa27.07■■□□□ 1.92
LIME1-206ENST00000487026 ADPGKQ9BRR6 497 aa27.07■■□□□ 1.92
LIME1-206ENST00000487026 USTQ9Y2C2 406 aa27.07■■□□□ 1.92
LIME1-206ENST00000487026 CCDC195A0A1B0GUA6 201 aa27.06■■□□□ 1.92
LIME1-206ENST00000487026 VCPP55072 806 aaKnown RBP27.06■■□□□ 1.92
LIME1-206ENST00000487026 TUSC3Q13454 348 aa27.06■■□□□ 1.92
LIME1-206ENST00000487026 MTMR3Q13615 1198 aa27.06■■□□□ 1.92
LIME1-206ENST00000487026 PLCD3Q8N3E9 789 aa27.06■■□□□ 1.92
LIME1-206ENST00000487026 PRSS33Q8NF86 280 aa27.06■■□□□ 1.92
LIME1-206ENST00000487026 RAB34Q9BZG1 259 aa27.06■■□□□ 1.92
LIME1-206ENST00000487026 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.06■■□□□ 1.92
LIME1-206ENST00000487026 ZMYM2Q9UBW7 1377 aa27.06■■□□□ 1.92
LIME1-206ENST00000487026 PLXNA3P51805 1871 aa27.06■■□□□ 1.92
LIME1-206ENST00000487026 ST18O60284 1047 aa27.05■■□□□ 1.92
LIME1-206ENST00000487026 RFPL2O75678 378 aa27.05■■□□□ 1.92
LIME1-206ENST00000487026 CD2BP2O95400 341 aaKnown RBP27.05■■□□□ 1.92
LIME1-206ENST00000487026 THP07101 528 aa27.05■■□□□ 1.92
LIME1-206ENST00000487026 KRT79Q5XKE5 535 aa27.05■■□□□ 1.92
LIME1-206ENST00000487026 PRSS55Q6UWB4 352 aaPredicted RBP27.05■■□□□ 1.92
LIME1-206ENST00000487026 DTHD1Q6ZMT9 781 aa27.05■■□□□ 1.92
LIME1-206ENST00000487026 CCDC149Q6ZUS6 474 aa27.05■■□□□ 1.92
LIME1-206ENST00000487026 UBALD2Q8IYN6 164 aa27.05■■□□□ 1.92
LIME1-206ENST00000487026 DNM3Q9UQ16 869 aa27.05■■□□□ 1.92
LIME1-206ENST00000487026 EFNA5P52803 228 aa27.04■■□□□ 1.92
LIME1-206ENST00000487026 NAB2Q15742 525 aa27.04■■□□□ 1.92
LIME1-206ENST00000487026 C15orf39Q6ZRI6 1047 aa27.04■■□□□ 1.92
LIME1-206ENST00000487026 ACSF2Q96CM8 615 aaPredicted RBP27.04■■□□□ 1.92
LIME1-206ENST00000487026 TMX3Q96JJ7 454 aa27.04■■□□□ 1.92
LIME1-206ENST00000487026 MMTAG2Q9BU76 263 aaKnown RBP27.04■■□□□ 1.92
LIME1-206ENST00000487026 STK24Q9Y6E0 443 aa27.04■■□□□ 1.92
LIME1-206ENST00000487026 C2orf16Q68DN1 1984 aa27.04■■□□□ 1.92
LIME1-206ENST00000487026 CCDC169A6NNP5 214 aa27.03■■□□□ 1.92
LIME1-206ENST00000487026 K7ERI5 159 aa27.03■■□□□ 1.92
LIME1-206ENST00000487026 TGM5O43548 720 aa27.03■■□□□ 1.92
LIME1-206ENST00000487026 KIF4AO95239 1232 aa27.03■■□□□ 1.92
LIME1-206ENST00000487026 PEX3P56589 373 aa27.03■■□□□ 1.92
LIME1-206ENST00000487026 ZRSR1Q15695 479 aaKnown RBP27.03■■□□□ 1.92
LIME1-206ENST00000487026 RTP2Q5QGT7 225 aa27.03■■□□□ 1.92
LIME1-206ENST00000487026 ATF7IP2Q5U623 682 aa27.03■■□□□ 1.92
LIME1-206ENST00000487026 OTOP3Q7RTS5 596 aa27.03■■□□□ 1.92
LIME1-206ENST00000487026 KCNK18Q7Z418 384 aa27.03■■□□□ 1.92
LIME1-206ENST00000487026 DAW1Q8N136 415 aa27.03■■□□□ 1.92
LIME1-206ENST00000487026 CMASQ8NFW8 434 aaPredicted RBP27.03■■□□□ 1.92
LIME1-206ENST00000487026 RUSC1Q9BVN2 902 aa27.03■■□□□ 1.92
LIME1-206ENST00000487026 KIF3AQ9Y496 699 aa27.03■■□□□ 1.92
LIME1-206ENST00000487026 SF3B1O75533 1304 aaKnown RBP eCLIP27.02■■□□□ 1.92
LIME1-206ENST00000487026 LAD1O00515 517 aa27.02■■□□□ 1.92
LIME1-206ENST00000487026 HIP1RO75146 1068 aa27.02■■□□□ 1.92
LIME1-206ENST00000487026 IGFBP6P24592 240 aaPredicted RBP27.02■■□□□ 1.92
LIME1-206ENST00000487026 GJB2P29033 226 aa27.02■■□□□ 1.92
LIME1-206ENST00000487026 AVPR2P30518 371 aa27.02■■□□□ 1.92
LIME1-206ENST00000487026 PRPHP41219 470 aa27.02■■□□□ 1.92
LIME1-206ENST00000487026 NPTX2P47972 431 aa27.02■■□□□ 1.92
LIME1-206ENST00000487026 DCAF4L1Q3SXM0 396 aa27.02■■□□□ 1.92
LIME1-206ENST00000487026 FAM171A1Q5VUB5 890 aa27.02■■□□□ 1.92
LIME1-206ENST00000487026 CEP57Q86XR8 500 aa27.02■■□□□ 1.92
LIME1-206ENST00000487026 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.02■■□□□ 1.92
LIME1-206ENST00000487026 FNIP2Q9P278 1114 aa27.02■■□□□ 1.92
LIME1-206ENST00000487026 DPP7Q9UHL4 492 aa27.02■■□□□ 1.92
LIME1-206ENST00000487026 PIEZO1Q92508 2521 aa27.02■■□□□ 1.92
LIME1-206ENST00000487026 DENND4AQ7Z401 1863 aa27.02■■□□□ 1.92
LIME1-206ENST00000487026 GLRA4Q5JXX5 417 aa27.01■■□□□ 1.91
LIME1-206ENST00000487026 RINT1Q6NUQ1 792 aa27.01■■□□□ 1.91
LIME1-206ENST00000487026 LILRA6Q6PI73 481 aa27.01■■□□□ 1.91
LIME1-206ENST00000487026 SFI1A8K8P3 1242 aa27■■□□□ 1.91
LIME1-206ENST00000487026 N4BP1O75113 896 aaKnown RBP27■■□□□ 1.91
LIME1-206ENST00000487026 ELMSAN1Q6PJG2 1045 aa27■■□□□ 1.91
LIME1-206ENST00000487026 C1orf186Q6ZWK4 172 aa27■■□□□ 1.91
LIME1-206ENST00000487026 SMG7Q92540 1137 aaKnown RBP27■■□□□ 1.91
LIME1-206ENST00000487026 ZNF707Q96C28 371 aaPredicted RBP27■■□□□ 1.91
LIME1-206ENST00000487026 PLIN2Q99541 437 aa27■■□□□ 1.91
LIME1-206ENST00000487026 TTPALQ9BTX7 342 aa27■■□□□ 1.91
LIME1-206ENST00000487026 H3BQV1 296 aa26.99■■□□□ 1.91
LIME1-206ENST00000487026 RAD51AP2Q09MP3 1159 aa26.99■■□□□ 1.91
LIME1-206ENST00000487026 RILPL1Q5EBL4 403 aa26.99■■□□□ 1.91
LIME1-206ENST00000487026 TAS1R3Q7RTX0 852 aa26.99■■□□□ 1.91
LIME1-206ENST00000487026 GPR65Q8IYL9 337 aa26.99■■□□□ 1.91
LIME1-206ENST00000487026 CEP120Q8N960 986 aa26.99■■□□□ 1.91
LIME1-206ENST00000487026 HDAC7Q8WUI4 952 aa26.99■■□□□ 1.91
LIME1-206ENST00000487026 PHOX2BQ99453 314 aa26.99■■□□□ 1.91
LIME1-206ENST00000487026 ACO2Q99798 780 aaKnown RBP26.99■■□□□ 1.91
LIME1-206ENST00000487026 NT5C3AQ9H0P0 336 aa26.99■■□□□ 1.91
LIME1-206ENST00000487026 PLEKHA4Q9H4M7 779 aa26.99■■□□□ 1.91
LIME1-206ENST00000487026 WDR6Q9NNW5 1121 aaKnown RBP26.99■■□□□ 1.91
LIME1-206ENST00000487026 TNFSF13BQ9Y275 285 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms