RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 C1orf54Q8WWF1 131 aa13.07□□□□□ -0.32
COL3A1-206ENST00000487010 ZNF653Q96CK0 615 aa13.07□□□□□ -0.32
COL3A1-206ENST00000487010 ZDHHC15Q96MV8 337 aa13.07□□□□□ -0.32
COL3A1-206ENST00000487010 KCNK9Q9NPC2 374 aa13.07□□□□□ -0.32
COL3A1-206ENST00000487010 LRRC4BQ9NT99 713 aa13.07□□□□□ -0.32
COL3A1-206ENST00000487010 UVRAGQ9P2Y5 699 aa13.07□□□□□ -0.32
COL3A1-206ENST00000487010 FAM198AQ9UFP1 575 aa13.07□□□□□ -0.32
COL3A1-206ENST00000487010 PRKAG3Q9UGI9 489 aa13.07□□□□□ -0.32
COL3A1-206ENST00000487010 PRR12Q9ULL5 1215 aa13.07□□□□□ -0.32
COL3A1-206ENST00000487010 LOXHD1Q8IVV2 1947 aa13.07□□□□□ -0.32
COL3A1-206ENST00000487010 KLRG2A4D1S0 409 aaPredicted RBP13.06□□□□□ -0.32
COL3A1-206ENST00000487010 CLDN3O15551 220 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 CYP26A1O43174 497 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 TTC4O95801 387 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 CFBP00751 764 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 SGO2Q562F6 1265 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 SLC47A2Q86VL8 602 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 C12orf56Q8IXR9 622 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 MAB21L3Q8N8X9 362 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 PLEKHO2Q8TD55 490 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 KLHL29Q96CT2 875 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 KREMEN1Q96MU8 473 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 LXNQ9BS40 222 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 WDR11Q9BZH6 1224 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 TMEM206Q9H813 350 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 RXFP1Q9HBX9 757 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 ARHGEF3Q9NR81 526 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 CTNNAL1Q9UBT7 734 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 ASIC3Q9UHC3 531 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 GTF3C4Q9UKN8 822 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 PCDHAC2Q9Y5I4 1007 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 TCEA3O75764 348 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 KRT16P08779 473 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 CCND1P24385 295 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 IVDP26440 423 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 MKRN4PQ13434 485 aaPredicted RBP13.06□□□□□ -0.32
COL3A1-206ENST00000487010 SNX1Q13596 522 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 MPP2Q14168 576 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 TEX2Q8IWB9 1127 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 SNF8Q96H20 258 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 IFT74Q96LB3 600 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 ACCSQ96QU6 501 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 CBWD1Q9BRT8 395 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 ZNF577Q9BSK1 485 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 PLVAPQ9BX97 442 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 TMEM117Q9H0C3 514 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 MLXIPLQ9NP71 852 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 ACP6Q9NPH0 428 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 KCNQ5Q9NR82 932 aa13.06□□□□□ -0.32
COL3A1-206ENST00000487010 NOP53Q9NZM5 478 aaKnown RBP13.06□□□□□ -0.32
COL3A1-206ENST00000487010 FOXO6A8MYZ6 492 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 PMM2O15305 246 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 POLR2MP0CAP2 368 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 ARP10275 920 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 MAPTP10636 758 aaKnown RBP13.05□□□□□ -0.32
COL3A1-206ENST00000487010 BRAFP15056 766 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 UBXN2AP68543 259 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 MKRN3Q13064 507 aaKnown RBP13.05□□□□□ -0.32
COL3A1-206ENST00000487010 ALCAMQ13740 583 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 PTK6Q13882 451 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 NAA25Q14CX7 972 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 LLGL1Q15334 1064 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 CEP55Q53EZ4 464 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 PADI6Q6TGC4 694 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 B3GNT9Q6UX72 402 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 NSMFQ6X4W1 530 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 SYDE1Q6ZW31 735 aaPredicted RBP13.05□□□□□ -0.32
COL3A1-206ENST00000487010 ASRGL1Q7L266 308 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 FITM2Q8N6M3 262 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 XXYLT1Q8NBI6 393 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 ZSWIM2Q8NEG5 633 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 GDAP1Q8TB36 358 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 C7orf43Q8WVR3 580 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 SHC3Q92529 594 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 THOC1Q96FV9 657 aaKnown RBP13.05□□□□□ -0.32
COL3A1-206ENST00000487010 IDI2Q9BXS1 227 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 PNMA3Q9UL41 463 aa13.05□□□□□ -0.32
COL3A1-206ENST00000487010 MAPK13O15264 365 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 GH1P01241 217 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 PDE6BP35913 854 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 MXI1P50539 228 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 ITGA8P53708 1063 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 MFAP3P55082 362 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 JAG1P78504 1218 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 CDR2Q01850 454 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 CAV1Q03135 178 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 TRAF1Q13077 416 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 KYNUQ16719 465 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 MAEAQ7L5Y9 396 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 KIF2BQ8N4N8 673 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 PRCCQ92733 491 aaPredicted RBP13.04□□□□□ -0.32
COL3A1-206ENST00000487010 TGS1Q96RS0 853 aaKnown RBP13.04□□□□□ -0.32
COL3A1-206ENST00000487010 TEKT3Q9BXF9 490 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL3A1-206ENST00000487010 CHST7Q9NS84 486 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 HSPBP1Q9NZL4 362 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 LARSQ9P2J5 1176 aaKnown RBP13.04□□□□□ -0.32
COL3A1-206ENST00000487010 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
COL3A1-206ENST00000487010 ZNFX1Q9P2E3 1918 aaKnown RBP13.04□□□□□ -0.32
COL3A1-206ENST00000487010 VIL1P09327 827 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms