RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ATP5DP30049 168 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 CA8P35219 290 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 GUCY1A3Q02108 690 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 DUOXA2Q1HG44 320 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 CCDC38Q502W7 563 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 HHATQ5VTY9 493 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 PNMA8AQ86V59 439 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-216ENST00000486741 ARHGEF19Q8IW93 802 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 OR6B3Q8NGW1 331 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 KCTD10Q9H3F6 313 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 SPON1Q9HCB6 807 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 MAGED2Q9UNF1 606 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-216ENST00000486741 M0QZ92 97 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 DDX3XO00571 662 aaKnown RBP eCLIP14.13□□□□□ -0.155e-16■■■■□ 24.5
HMGN1-216ENST00000486741 RASGRF2O14827 1237 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 ZNF263O14978 683 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 SLC26A4O43511 780 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 GLI1P08151 1106 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 CYP3A4P08684 503 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 GUCY2CP25092 1073 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 SV2AQ7L0J3 742 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 KCTD6Q8NC69 237 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 FAM167AQ96KS9 214 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 SLC38A10Q9HBR0 1119 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 TMEM8AQ9HCN3 771 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 A1CFQ9NQ94 594 aaKnown RBP14.13□□□□□ -0.15
HMGN1-216ENST00000486741 KCND1Q9NSA2 647 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 RIPK3Q9Y572 518 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 PKD1L3Q7Z443 1732 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 ANKRD63C9JTQ0 380 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 CAPN9O14815 690 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 FGFR4P22455 802 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 PPP6R3Q5H9R7 873 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-216ENST00000486741 SYCP2LQ5T4T6 812 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 ACSF2Q96CM8 615 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-216ENST00000486741 GPRASP2Q96D09 838 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 ZBTB45Q96K62 511 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-216ENST00000486741 SEPT10Q9P0V9 454 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 RRP15Q9Y3B9 282 aaKnown RBP14.12□□□□□ -0.15
HMGN1-216ENST00000486741 CAPN7Q9Y6W3 813 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 IGSF9BQ9UPX0 1349 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 TMEM253P0C7T8 217 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 EZRP15311 586 aaKnown RBP14.12□□□□□ -0.15
HMGN1-216ENST00000486741 HSPA6P17066 643 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 SLC5A4Q9NY91 659 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 VAV3Q9UKW4 847 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 TAF1P21675 1872 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 DUOX1Q9NRD9 1551 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 OATP04181 439 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 PTPRAP18433 802 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 CLCN3P51790 818 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 PPP3CAQ08209 521 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 LY6KQ17RY6 165 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 MOB2Q70IA6 237 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 FBXO16Q8IX29 292 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-216ENST00000486741 RBBP8NLQ8NC74 664 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-216ENST00000486741 HOMER3Q9NSC5 361 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 AIPL1Q9NZN9 384 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 MAD1L1Q9Y6D9 718 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 FAM169AQ9Y6X4 670 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 TGFB1I1O43294 461 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 NOP14P78316 857 aaKnown RBP14.12□□□□□ -0.15
HMGN1-216ENST00000486741 UGCGQ16739 394 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 BTNL9Q6UXG8 535 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 CACNA2D3Q8IZS8 1091 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 MMGT1Q8N4V1 131 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 GDAP1Q8TB36 358 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 PRPF31Q8WWY3 499 aaKnown RBP14.12□□□□□ -0.15
HMGN1-216ENST00000486741 ZIM3Q96PE6 472 aa14.12□□□□□ -0.15
HMGN1-216ENST00000486741 CLK2P49760 499 aaKnown RBP14.11□□□□□ -0.15
HMGN1-216ENST00000486741 YWHAGP61981 247 aaKnown RBP eCLIP14.11□□□□□ -0.15
HMGN1-216ENST00000486741 ITGB3BPQ13352 177 aaPredicted RBP14.11□□□□□ -0.15
HMGN1-216ENST00000486741 TMED2Q15363 201 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 SIAH1Q8IUQ4 282 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 C4orf19Q8IY42 314 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 TRAPPC12Q8WVT3 735 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 THOC1Q96FV9 657 aaKnown RBP14.11□□□□□ -0.15
HMGN1-216ENST00000486741 A6NNZ2 444 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 MAFGO15525 162 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 RFX1P22670 979 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 PSMC1P62191 440 aaKnown RBP14.11□□□□□ -0.15
HMGN1-216ENST00000486741 BBS9Q3SYG4 887 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 TUBB8Q3ZCM7 444 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 CREG2Q8IUH2 290 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 FAM81BQ96LP2 452 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 TAS2R14Q9NYV8 317 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 COL20A1Q9P218 1284 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 PNMA3Q9UL41 463 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 FRMPD4Q14CM0 1322 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 ONECUT3O60422 494 aaPredicted RBP14.11□□□□□ -0.15
HMGN1-216ENST00000486741 PPFIA4O75335 1185 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 DSG3P32926 999 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 NME8Q8N427 588 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 TRPM4Q8TD43 1214 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 PPP1R13LQ8WUF5 828 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 CASKIN2Q8WXE0 1202 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 P2RX7Q99572 595 aaKnown RBP14.11□□□□□ -0.15
HMGN1-216ENST00000486741 NUB1Q9Y5A7 615 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 UBE4BO95155 1302 aa14.11□□□□□ -0.15
HMGN1-216ENST00000486741 F5H423 210 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms