RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 PRPF4BQ13523 1007 aaKnown RBP21.95■■□□□ 1.1
HPS3-206ENST00000486530 GLE1Q53GS7 698 aaKnown RBP21.95■■□□□ 1.1
HPS3-206ENST00000486530 IER5Q5VY09 327 aa21.95■■□□□ 1.1
HPS3-206ENST00000486530 DAAM2Q86T65 1068 aa21.95■■□□□ 1.1
HPS3-206ENST00000486530 PALB2Q86YC2 1186 aa21.95■■□□□ 1.1
HPS3-206ENST00000486530 DHX37Q8IY37 1157 aaKnown RBP21.95■■□□□ 1.1
HPS3-206ENST00000486530 SLC35G2Q8TBE7 412 aa21.95■■□□□ 1.1
HPS3-206ENST00000486530 ATP8B4Q8TF62 1192 aa21.95■■□□□ 1.1
HPS3-206ENST00000486530 PTPN18Q99952 460 aa21.95■■□□□ 1.1
HPS3-206ENST00000486530 ISCUQ9H1K1 167 aa21.95■■□□□ 1.1
HPS3-206ENST00000486530 RBM12Q9NTZ6 932 aaKnown RBP21.95■■□□□ 1.1
HPS3-206ENST00000486530 TAS2R14Q9NYV8 317 aa21.95■■□□□ 1.1
HPS3-206ENST00000486530 KCNK3O14649 394 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 SLC26A2P50443 739 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 EFNA5P52803 228 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 NLRP11P59045 1033 aaKnown RBP21.94■■□□□ 1.1
HPS3-206ENST00000486530 CCNA1P78396 465 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 RHOT2Q8IXI1 618 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 SPATA33Q96N06 139 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 MSTO1Q9BUK6 570 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 TARS2Q9BW92 718 aaKnown RBP21.94■■□□□ 1.1
HPS3-206ENST00000486530 STXBP5LQ9Y2K9 1186 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 A0A0B4J269 797 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 SGPL1O95470 568 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 MATR3P43243 847 aaKnown RBP eCLIP21.94■■□□□ 1.1
HPS3-206ENST00000486530 TTLL4Q14679 1199 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 ZPBP2Q6X784 338 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 NOP9Q86U38 636 aaKnown RBP21.94■■□□□ 1.1
HPS3-206ENST00000486530 NT5DC3Q86UY8 548 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 LRRC1Q9BTT6 524 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 SELENOOQ9BVL4 669 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 UBXN6Q9BZV1 441 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 THAP2Q9H0W7 228 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 GOLPH3Q9H4A6 298 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 OSGEPQ9NPF4 335 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.94■■□□□ 1.1
HPS3-206ENST00000486530 C1orf112Q9NSG2 853 aa21.94■■□□□ 1.1
HPS3-206ENST00000486530 CYP26A1O43174 497 aa21.93■■□□□ 1.1
HPS3-206ENST00000486530 RTN2O75298 545 aa21.93■■□□□ 1.1
HPS3-206ENST00000486530 GZMAP12544 262 aa21.93■■□□□ 1.1
HPS3-206ENST00000486530 MARK3P27448 753 aa21.93■■□□□ 1.1
HPS3-206ENST00000486530 GCLCP48506 637 aaPredicted RBP21.93■■□□□ 1.1
HPS3-206ENST00000486530 HADHBP55084 474 aaKnown RBP21.93■■□□□ 1.1
HPS3-206ENST00000486530 MXD4Q14582 209 aaPredicted RBP21.93■■□□□ 1.1
HPS3-206ENST00000486530 TCEAL1Q15170 157 aa21.93■■□□□ 1.1
HPS3-206ENST00000486530 ZACNQ401N2 412 aa21.93■■□□□ 1.1
HPS3-206ENST00000486530 C8orf74Q6P047 294 aa21.93■■□□□ 1.1
HPS3-206ENST00000486530 CRELD2Q6UXH1 353 aaPredicted RBP21.93■■□□□ 1.1
HPS3-206ENST00000486530 PRPF31Q8WWY3 499 aaKnown RBP21.93■■□□□ 1.1
HPS3-206ENST00000486530 JPH2Q9BR39 696 aaPredicted RBP21.93■■□□□ 1.1
HPS3-206ENST00000486530 HAPLN2Q9GZV7 340 aa21.93■■□□□ 1.1
HPS3-206ENST00000486530 RBAKQ9NYW8 714 aaPredicted RBP21.93■■□□□ 1.1
HPS3-206ENST00000486530 ANKFY1Q9P2R3 1169 aa21.93■■□□□ 1.1
HPS3-206ENST00000486530 MORF4L1Q9UBU8 362 aa21.93■■□□□ 1.1
HPS3-206ENST00000486530 AMFRQ9UKV5 643 aa21.93■■□□□ 1.1
HPS3-206ENST00000486530 ADGRA2Q96PE1 1338 aa21.93■■□□□ 1.1
HPS3-206ENST00000486530 TXNP10599 105 aaKnown RBP21.92■■□□□ 1.1
HPS3-206ENST00000486530 TNNI1P19237 187 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 ACOT2P49753 483 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 PDE6CP51160 858 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 DRP2Q13474 957 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 PLCB4Q15147 1175 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 CDCA2Q69YH5 1023 aaPredicted RBP21.92■■□□□ 1.1
HPS3-206ENST00000486530 TRIM50Q86XT4 487 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 SCFD2Q8WU76 684 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 ZNF516Q92618 1163 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 ARHGEF26Q96DR7 871 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 ZBTB45Q96K62 511 aaPredicted RBP21.92■■□□□ 1.1
HPS3-206ENST00000486530 IGKV6-21A0A0C4DH24 114 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 BUB1BO60566 1050 aaPredicted RBP21.92■■□□□ 1.1
HPS3-206ENST00000486530 FTLP02792 175 aaPredicted RBP21.92■■□□□ 1.1
HPS3-206ENST00000486530 CHRNB2P17787 502 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 GABPB1Q06547 395 aaPredicted RBP21.92■■□□□ 1.1
HPS3-206ENST00000486530 CCNI2Q6ZMN8 369 aaPredicted RBP21.92■■□□□ 1.1
HPS3-206ENST00000486530 SLC47A2Q86VL8 602 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 USP38Q8NB14 1042 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 ACTRT1Q8TDG2 376 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 HES6Q96HZ4 224 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 SMARCAD1Q9H4L7 1026 aa21.92■■□□□ 1.1
HPS3-206ENST00000486530 ZBTB42B2RXF5 422 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 C4BPAP04003 597 aaKnown RBP21.91■■□□□ 1.1
HPS3-206ENST00000486530 EDN1P05305 212 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 CYP11B1P15538 503 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 CDR2Q01850 454 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 SMC1AQ14683 1233 aaKnown RBP21.91■■□□□ 1.1
HPS3-206ENST00000486530 CASP8Q14790 479 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 WDR44Q5JSH3 913 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 CHADLQ6NUI6 762 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 ARMCX2Q7L311 632 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 ZBTB8OSQ8IWT0 167 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 TATDN2Q93075 761 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 MRPL4Q9BYD3 311 aaKnown RBP21.91■■□□□ 1.1
HPS3-206ENST00000486530 CCDC113Q9H0I3 377 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 SUGCTQ9HAC7 445 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 PDE11AQ9HCR9 933 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 STIM2Q9P246 746 aa21.91■■□□□ 1.1
HPS3-206ENST00000486530 DIS3Q9Y2L1 958 aaKnown RBP21.91■■□□□ 1.1
HPS3-206ENST00000486530 PIK3CAP42336 1068 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 GPC5P78333 572 aa21.9■■□□□ 1.1
HPS3-206ENST00000486530 FMO1Q01740 532 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms