RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 PPP1R2P3Q6NXS1 205 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 CRELD2Q6UXH1 353 aaPredicted RBP12.9□□□□□ -0.34
PKP4-213ENST00000486254 C2orf69Q8N8R5 385 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 SPATA4Q8NEY3 305 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 TAS1R2Q8TE23 839 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 COG1Q8WTW3 980 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 PRPF31Q8WWY3 499 aaKnown RBP12.9□□□□□ -0.34
PKP4-213ENST00000486254 SEMA4DQ92854 862 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 CCDC127Q96BQ5 260 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 KATNBL1Q9H079 304 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 EFCC1Q9HA90 598 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 ABCB6Q9NP58 842 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 C1orf112Q9NSG2 853 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 IVNS1ABPQ9Y6Y0 642 aa12.9□□□□□ -0.34
PKP4-213ENST00000486254 MAGEB2O15479 319 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 FAM189A1O60320 539 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 SRGAP2O75044 1071 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 KIF4AO95239 1232 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 TFRCP02786 760 aaKnown RBP12.9□□□□□ -0.35
PKP4-213ENST00000486254 C4BPAP04003 597 aaKnown RBP12.9□□□□□ -0.35
PKP4-213ENST00000486254 PNMA6AP0CW24 399 aaPredicted RBP12.9□□□□□ -0.35
PKP4-213ENST00000486254 CYP2C8P10632 490 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 PROZP22891 400 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 TNFRSF8P28908 595 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 MAPK4P31152 587 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 BPIFB4P59827 614 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 MCL1Q07820 350 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 LAMTOR4Q0VGL1 99 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 RPS6KA1Q15418 735 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 MAPK6Q16659 721 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 FAM187BQ17R55 369 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 CCDC181Q5TID7 509 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 C11orf63Q6NUN7 778 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 TAPT1Q6NXT6 567 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 NFRKBQ6P4R8 1299 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 EEPD1Q7L9B9 569 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 KRT222Q8N1A0 295 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 PPM1KQ8N3J5 372 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 ACTRT1Q8TDG2 376 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 FAXDC2Q96IV6 333 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 PNKPQ96T60 521 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 MSTO1Q9BUK6 570 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 TTC7AQ9ULT0 858 aaPredicted RBP12.9□□□□□ -0.35
PKP4-213ENST00000486254 CNTN6Q9UQ52 1028 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 STXBP5LQ9Y2K9 1186 aa12.9□□□□□ -0.35
PKP4-213ENST00000486254 TRPM7Q96QT4 1865 aa12.89□□□□□ -0.35
PKP4-213ENST00000486254 CNTNAP2Q9UHC6 1331 aa12.89□□□□□ -0.35
PKP4-213ENST00000486254 ABLIM1O14639 778 aa12.89□□□□□ -0.35
PKP4-213ENST00000486254 RTN2O75298 545 aa12.89□□□□□ -0.35
PKP4-213ENST00000486254 LRRN2O75325 713 aa12.89□□□□□ -0.35
PKP4-213ENST00000486254 CLSTN1O94985 981 aa12.89□□□□□ -0.35
PKP4-213ENST00000486254 TBXAS1P24557 533 aaPredicted RBP12.89□□□□□ -0.35
PKP4-213ENST00000486254 PDE6CP51160 858 aa12.89□□□□□ -0.35
PKP4-213ENST00000486254 NLRP11P59045 1033 aaKnown RBP12.89□□□□□ -0.35
PKP4-213ENST00000486254 CDR2Q01850 454 aa12.89□□□□□ -0.35
PKP4-213ENST00000486254 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
PKP4-213ENST00000486254 BEND6Q5SZJ8 279 aaPredicted RBP12.89□□□□□ -0.35
PKP4-213ENST00000486254 MAP1SQ66K74 1059 aaPredicted RBP12.89□□□□□ -0.35
PKP4-213ENST00000486254 WDR49Q8IV35 697 aa12.89□□□□□ -0.35
PKP4-213ENST00000486254 LINC01465Q8N7H1 131 aa12.89□□□□□ -0.35
PKP4-213ENST00000486254 TAF4BQ92750 862 aa12.89□□□□□ -0.35
PKP4-213ENST00000486254 TARS2Q9BW92 718 aaKnown RBP12.89□□□□□ -0.35
PKP4-213ENST00000486254 RBAKQ9NYW8 714 aaPredicted RBP12.89□□□□□ -0.35
PKP4-213ENST00000486254 CLEC11AQ9Y240 323 aa12.89□□□□□ -0.35
PKP4-213ENST00000486254 ACKR2O00590 384 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 MAP2K7O14733 419 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 ZNF185O15231 689 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 OGTO15294 1046 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 CLDN3O15551 220 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 SORBS3O60504 671 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 PPFIA4O75335 1185 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 TBC1D8O95759 1140 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 DLATP10515 647 aaKnown RBP12.88□□□□□ -0.35
PKP4-213ENST00000486254 PTENP60484 403 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 LONRF2Q1L5Z9 754 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 WDR44Q5JSH3 913 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 WDR78Q5VTH9 848 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 TSHZ1Q6ZSZ6 1077 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 NT5DC3Q86UY8 548 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 GPIHBP1Q8IV16 184 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 HES6Q96HZ4 224 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 CAPZA3Q96KX2 299 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 ACO2Q99798 780 aaKnown RBP12.88□□□□□ -0.35
PKP4-213ENST00000486254 FUT8Q9BYC5 575 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 HAPLN2Q9GZV7 340 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 FZD8Q9H461 694 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.88□□□□□ -0.35
PKP4-213ENST00000486254 SLC5A4Q9NY91 659 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 TMEM59LQ9UK28 342 aa12.88□□□□□ -0.35
PKP4-213ENST00000486254 SLC15A5A6NIM6 579 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 MIF4GDA9UHW6 222 aaKnown RBP12.87□□□□□ -0.35
PKP4-213ENST00000486254 C22orf31O95567 290 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 FTCDO95954 541 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 HLA-DRAP01903 254 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 LGALS2P05162 132 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 PRKCBP05771 671 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 HOXC6P09630 235 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 CYP11B1P15538 503 aa12.87□□□□□ -0.35
PKP4-213ENST00000486254 NOP2P46087 812 aaKnown RBP12.87□□□□□ -0.35
PKP4-213ENST00000486254 VSNL1P62760 191 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms