RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 STAG3L1P0CL83 205 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 FGFR1P11362 822 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 EFNA5P52803 228 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 MAPK6Q16659 721 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 NOTUMQ6P988 496 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 CDR2LQ86X02 465 aaPredicted RBP14.2□□□□□ -0.14
SSR4-211ENST00000486204 IQUBQ8NA54 791 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 SUSD6Q92537 303 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 STAMQ92783 540 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 RMDN1Q96DB5 314 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 CCDC51Q96ER9 411 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 EIF2AQ9BY44 585 aaKnown RBP14.2□□□□□ -0.14
SSR4-211ENST00000486204 GOLPH3LQ9H4A5 285 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 TMEM134Q9H6X4 195 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 TLE6Q9H808 572 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 PARVGQ9HBI0 331 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 LARSQ9P2J5 1176 aaKnown RBP14.2□□□□□ -0.14
SSR4-211ENST00000486204 VPS13AQ96RL7 3174 aa14.2□□□□□ -0.14
SSR4-211ENST00000486204 ACTN4O43707 911 aaKnown RBP14.19□□□□□ -0.14
SSR4-211ENST00000486204 FAM13AO94988 1023 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 KRT18P05783 430 aaKnown RBP14.19□□□□□ -0.14
SSR4-211ENST00000486204 MAPTP10636 758 aaKnown RBP14.19□□□□□ -0.14
SSR4-211ENST00000486204 IBSPP21815 317 aaPredicted RBP14.19□□□□□ -0.14
SSR4-211ENST00000486204 RAB27AP51159 221 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 PRPF4BQ13523 1007 aaKnown RBP14.19□□□□□ -0.14
SSR4-211ENST00000486204 CLLU1OSQ5K130 101 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 NT5DC1Q5TFE4 455 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 EEF1DP3Q658K8 133 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 CNNM4Q6P4Q7 775 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 MRPL10Q7Z7H8 261 aaKnown RBP14.19□□□□□ -0.14
SSR4-211ENST00000486204 SFR1Q86XK3 245 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 CMTR2Q8IYT2 770 aaKnown RBP14.19□□□□□ -0.14
SSR4-211ENST00000486204 KREMEN2Q8NCW0 462 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 SMG8Q8ND04 991 aaKnown RBP14.19□□□□□ -0.14
SSR4-211ENST00000486204 TRIM9Q9C026 710 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 PDZD7Q9H5P4 517 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 MAGEF1Q9HAY2 307 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 LRFN2Q9ULH4 789 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 PCDHB7Q9Y5E2 793 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 PCDHB2Q9Y5E7 798 aa14.19□□□□□ -0.14
SSR4-211ENST00000486204 K7ERI5 159 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 ABLIM1O14639 778 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 TRAK2O60296 914 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 TBCAO75347 108 aaKnown RBP14.18□□□□□ -0.14
SSR4-211ENST00000486204 EOMESO95936 686 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 SKIP12755 728 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 NDUFA8P51970 172 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 ASTLQ6HA08 431 aaPredicted RBP14.18□□□□□ -0.14
SSR4-211ENST00000486204 SLC27A1Q6PCB7 646 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 AGMOQ6ZNB7 445 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 HAUS6Q7Z4H7 955 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 UBALD2Q8IYN6 164 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 MYCT1Q8N699 235 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 FSIP1Q8NA03 581 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 KLHL23Q8NBE8 558 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 POF1BQ8WVV4 589 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 MRPS27Q92552 414 aaKnown RBP14.18□□□□□ -0.14
SSR4-211ENST00000486204 LPPQ93052 612 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 IPO9Q96P70 1041 aaKnown RBP14.18□□□□□ -0.14
SSR4-211ENST00000486204 RNF216Q9NWF9 866 aaPredicted RBP14.18□□□□□ -0.14
SSR4-211ENST00000486204 HCSTQ9UBK5 93 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 SERTAD1Q9UHV2 236 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 IPPQ9Y573 584 aa14.18□□□□□ -0.14
SSR4-211ENST00000486204 FAM186AA6NE01 2351 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 RIF1Q5UIP0 2472 aaKnown RBP14.17□□□□□ -0.14
SSR4-211ENST00000486204 K7ENM7 598 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 PER2O15055 1255 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 PPP1R37O75864 691 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 SLFN14P0C7P3 912 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 LIG1P18858 919 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 PROZP22891 400 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 CASP1P29466 404 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 NMT1P30419 496 aaKnown RBP14.17□□□□□ -0.14
SSR4-211ENST00000486204 SMTNP53814 917 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 LONRF3Q496Y0 759 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 PAN2Q504Q3 1202 aaKnown RBP14.17□□□□□ -0.14
SSR4-211ENST00000486204 RNF169Q8NCN4 708 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 MICAL1Q8TDZ2 1067 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 CNTNAP3BQ96NU0 1288 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 CASD1Q96PB1 797 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 ACO2Q99798 780 aaKnown RBP14.17□□□□□ -0.14
SSR4-211ENST00000486204 C7orf25Q9BPX7 421 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 PYM1Q9BRP8 204 aaKnown RBP14.17□□□□□ -0.14
SSR4-211ENST00000486204 STRA6Q9BX79 667 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 CNTNAP3Q9BZ76 1288 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 TMEM117Q9H0C3 514 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 NXF3Q9H4D5 531 aaKnown RBP14.17□□□□□ -0.14
SSR4-211ENST00000486204 ST6GALNAC4Q9H4F1 302 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 PTPRHQ9HD43 1115 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 KCNG1Q9UIX4 513 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 TNFSF13BQ9Y275 285 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 HES2Q9Y543 173 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 MRPL42Q9Y6G3 142 aaKnown RBP14.17□□□□□ -0.14
SSR4-211ENST00000486204 VWA8A3KMH1 1905 aa14.17□□□□□ -0.14
SSR4-211ENST00000486204 N4BP3O15049 544 aa14.16□□□□□ -0.14
SSR4-211ENST00000486204 NPTXRO95502 500 aa14.16□□□□□ -0.14
SSR4-211ENST00000486204 GAP43P17677 238 aa14.16□□□□□ -0.14
SSR4-211ENST00000486204 SP100P23497 879 aaPredicted RBP14.16□□□□□ -0.14
SSR4-211ENST00000486204 SYKP43405 635 aa14.16□□□□□ -0.14
SSR4-211ENST00000486204 RBM10P98175 930 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms