RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 CXCL16Q9H2A7 254 aa20.22■□□□□ 0.83
COL1A1-206ENST00000485870 ZHX3Q9H4I2 956 aa20.22■□□□□ 0.83
COL1A1-206ENST00000485870 KCNG1Q9UIX4 513 aa20.22■□□□□ 0.83
COL1A1-206ENST00000485870 FSD2A1L4K1 749 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 PTGESO14684 152 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 SPTLC2O15270 562 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 TBCAO75347 108 aaKnown RBP20.21■□□□□ 0.83
COL1A1-206ENST00000485870 NR1I2O75469 434 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 CTSAP10619 480 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 MAPTP10636 758 aaKnown RBP20.21■□□□□ 0.83
COL1A1-206ENST00000485870 HARSP12081 509 aaKnown RBP20.21■□□□□ 0.83
COL1A1-206ENST00000485870 PDIA4P13667 645 aaKnown RBP20.21■□□□□ 0.83
COL1A1-206ENST00000485870 DDIT3P35638 169 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 GIT2Q14161 759 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 RRAGBQ5VZM2 374 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 CEP120Q8N960 986 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 TMEM87AQ8NBN3 555 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 RABGGTAQ92696 567 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 MSLNLQ96KJ4 702 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 TCHPQ9BT92 498 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 PARVGQ9HBI0 331 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 PTPRHQ9HD43 1115 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 CACNG4Q9UBN1 327 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 STK17AQ9UEE5 414 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 FAM50BQ9Y247 325 aa20.21■□□□□ 0.83
COL1A1-206ENST00000485870 MBTPS2O43462 519 aa20.2■□□□□ 0.82
COL1A1-206ENST00000485870 NCKAP1LP55160 1127 aa20.2■□□□□ 0.82
COL1A1-206ENST00000485870 OSTNP61366 133 aa20.2■□□□□ 0.82
COL1A1-206ENST00000485870 MPZL3Q6UWV2 235 aa20.2■□□□□ 0.82
COL1A1-206ENST00000485870 ZBTB45Q96K62 511 aaPredicted RBP20.2■□□□□ 0.82
COL1A1-206ENST00000485870 COLEC11Q9BWP8 271 aa20.2■□□□□ 0.82
COL1A1-206ENST00000485870 PANK2Q9BZ23 570 aa20.2■□□□□ 0.82
COL1A1-206ENST00000485870 ANKFY1Q9P2R3 1169 aa20.2■□□□□ 0.82
COL1A1-206ENST00000485870 TRIP11Q15643 1979 aa20.2■□□□□ 0.82
COL1A1-206ENST00000485870 CASTOR2A6NHX0 329 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 H0YCG3 227 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 K7ENM7 598 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 CLASP2O75122 1294 aaKnown RBP20.19■□□□□ 0.82
COL1A1-206ENST00000485870 YEATS4O95619 227 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 THP07101 528 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 SRGAP2BP0DMP2 458 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 GRM5P41594 1212 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 ZNF131P52739 623 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 TUSC3Q13454 348 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 SMAD4Q13485 552 aaKnown RBP20.19■□□□□ 0.82
COL1A1-206ENST00000485870 PTPN14Q15678 1187 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 GLRA4Q5JXX5 417 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 DYMQ7RTS9 669 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 HAUS6Q7Z4H7 955 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 CCDC94Q9BW85 323 aaPredicted RBP20.19■□□□□ 0.82
COL1A1-206ENST00000485870 DAXXQ9UER7 740 aaPredicted RBP20.19■□□□□ 0.82
COL1A1-206ENST00000485870 STK39Q9UEW8 545 aa20.19■□□□□ 0.82
COL1A1-206ENST00000485870 C5orf42Q9H799 3197 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 A0A087X0B3 334 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 C2CD2LO14523 706 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 ABLIM1O14639 778 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 SOD2P04179 222 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 MCF2P10911 925 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 PROZP22891 400 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 STAT6P42226 847 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 COASYQ13057 564 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 KCNC3Q14003 757 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 CCDC73Q6ZRK6 1079 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 TAS1R1Q7RTX1 841 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 FAM178BQ8IXR5 827 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 PDILTQ8N807 584 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 SMRP1Q8NCR6 262 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 BICD1Q96G01 975 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 PAAF1Q9BRP4 392 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 HERC2P3Q9BVR0 1158 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 HCFC2Q9Y5Z7 792 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 IRAK3Q9Y616 596 aa20.18■□□□□ 0.82
COL1A1-206ENST00000485870 TRAK2O60296 914 aa20.17■□□□□ 0.82
COL1A1-206ENST00000485870 PPP6R2O75170 966 aa20.17■□□□□ 0.82
COL1A1-206ENST00000485870 TOM1L1O75674 476 aa20.17■□□□□ 0.82
COL1A1-206ENST00000485870 URODP06132 367 aa20.17■□□□□ 0.82
COL1A1-206ENST00000485870 MATR3P43243 847 aaKnown RBP eCLIP20.17■□□□□ 0.82
COL1A1-206ENST00000485870 YARSP54577 528 aaKnown RBP20.17■□□□□ 0.82
COL1A1-206ENST00000485870 HSP90AA2PQ14568 343 aaPredicted RBP20.17■□□□□ 0.82
COL1A1-206ENST00000485870 NOLC1Q14978 699 aaKnown RBP eCLIP20.17■□□□□ 0.82
COL1A1-206ENST00000485870 ZPBP2Q6X784 338 aa20.17■□□□□ 0.82
COL1A1-206ENST00000485870 SV2BQ7L1I2 683 aa20.17■□□□□ 0.82
COL1A1-206ENST00000485870 HASPINQ8TF76 798 aa20.17■□□□□ 0.82
COL1A1-206ENST00000485870 APOL5Q9BWW9 433 aa20.17■□□□□ 0.82
COL1A1-206ENST00000485870 MRPL17Q9NRX2 175 aaKnown RBP20.17■□□□□ 0.82
COL1A1-206ENST00000485870 CITO14578 2027 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 MYMKA6NI61 221 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 BRD1O95696 1058 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 NMT1P30419 496 aaKnown RBP20.16■□□□□ 0.82
COL1A1-206ENST00000485870 NAB2Q15742 525 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 SMAD2Q15796 467 aaKnown RBP20.16■□□□□ 0.82
COL1A1-206ENST00000485870 SEZ6Q53EL9 994 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 ANKRD54Q6NXT1 300 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 FUT10Q6P4F1 479 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 TMEM184AQ6ZMB5 413 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 DDX12PQ92771 950 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 CASP10Q92851 521 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 ACAP3Q96P50 834 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 GPR62Q9BZJ7 368 aa20.16■□□□□ 0.82
COL1A1-206ENST00000485870 CD320Q9NPF0 282 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms