RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 CDT1Q9H211 546 aa13.71□□□□□ -0.21
PTCD1-205ENST00000485746 TOPORSQ9NS56 1045 aaPredicted RBP13.71□□□□□ -0.21
PTCD1-205ENST00000485746 FNDC1Q4ZHG4 1894 aaPredicted RBP13.7□□□□□ -0.22
PTCD1-205ENST00000485746 CASTOR2A6NHX0 329 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 MYMKA6NI61 221 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 HIDE1A8MVS5 230 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 TULP1O00294 542 aaPredicted RBP13.7□□□□□ -0.22
PTCD1-205ENST00000485746 INPPL1O15357 1258 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 LINC01565O15544 149 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 B4GALT3O60512 393 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 TOM1L1O75674 476 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 BRD1O95696 1058 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 GAP43P17677 238 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 NMT1P30419 496 aaKnown RBP13.7□□□□□ -0.22
PTCD1-205ENST00000485746 GRM5P41594 1212 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 ZNF131P52739 623 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 KRT85P78386 507 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 NOLC1Q14978 699 aaKnown RBP eCLIP13.7□□□□□ -0.22
PTCD1-205ENST00000485746 DUSP6Q16828 381 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 TPRNQ4KMQ1 711 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 PTCRAQ6ISU1 281 aaPredicted RBP13.7□□□□□ -0.22
PTCD1-205ENST00000485746 KIAA1841Q6NSI8 718 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 TMEM173Q86WV6 379 aaPredicted RBP13.7□□□□□ -0.22
PTCD1-205ENST00000485746 SFR1Q86XK3 245 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 MRPL43Q8N983 215 aaKnown RBP13.7□□□□□ -0.22
PTCD1-205ENST00000485746 IQUBQ8NA54 791 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 AUTS2Q8WXX7 1259 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 UHRF1Q96T88 793 aaPredicted RBP13.7□□□□□ -0.22
PTCD1-205ENST00000485746 ZBP1Q9H171 429 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 MRPL44Q9H9J2 332 aaKnown RBP13.7□□□□□ -0.22
PTCD1-205ENST00000485746 TBX20Q9UMR3 447 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 PCDHA7Q9UN72 937 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 SSX2IPQ9Y2D8 614 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 COL6A3P12111 3177 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 ZMYM2Q9UBW7 1377 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 PRRC2BQ5JSZ5 2229 aaKnown RBP13.7□□□□□ -0.22
PTCD1-205ENST00000485746 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
PTCD1-205ENST00000485746 A0A087X0B3 334 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 C2orf71A6NGG8 1288 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 C2CD2LO14523 706 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 HNRNPDLO14979 420 aaKnown RBP13.69□□□□□ -0.22
PTCD1-205ENST00000485746 URODP06132 367 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 CTSAP10619 480 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 BMP1P13497 986 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 DSC1Q08554 894 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 TUSC3Q13454 348 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 HERC4Q5GLZ8 1057 aaPredicted RBP13.69□□□□□ -0.22
PTCD1-205ENST00000485746 GLRA4Q5JXX5 417 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 ZPBP2Q6X784 338 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 CCDC65Q8IXS2 484 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.69□□□□□ -0.22
PTCD1-205ENST00000485746 BCL7CQ8WUZ0 217 aaPredicted RBP13.69□□□□□ -0.22
PTCD1-205ENST00000485746 RABGGTAQ92696 567 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 STAMQ92783 540 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 SPATA32Q96LK8 384 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 EMILIN2Q9BXX0 1053 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 CUEDC2Q9H467 287 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 PTPRHQ9HD43 1115 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 MRPL17Q9NRX2 175 aaKnown RBP13.69□□□□□ -0.22
PTCD1-205ENST00000485746 PANK4Q9NVE7 773 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 TBC1D7Q9P0N9 293 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 CD207Q9UJ71 328 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 RCOR1Q9UKL0 485 aa13.69□□□□□ -0.22
PTCD1-205ENST00000485746 POLR2DO15514 142 aaKnown RBP13.68□□□□□ -0.22
PTCD1-205ENST00000485746 GCNT3O95395 438 aa13.68□□□□□ -0.22
PTCD1-205ENST00000485746 KLRC2P26717 231 aa13.68□□□□□ -0.22
PTCD1-205ENST00000485746 HSP90AA2PQ14568 343 aaPredicted RBP13.68□□□□□ -0.22
PTCD1-205ENST00000485746 CTC1Q2NKJ3 1217 aa13.68□□□□□ -0.22
PTCD1-205ENST00000485746 SHC4Q6S5L8 630 aa13.68□□□□□ -0.22
PTCD1-205ENST00000485746 CEP120Q8N960 986 aa13.68□□□□□ -0.22
PTCD1-205ENST00000485746 GSTCDQ8NEC7 633 aa13.68□□□□□ -0.22
PTCD1-205ENST00000485746 PYM1Q9BRP8 204 aaKnown RBP13.68□□□□□ -0.22
PTCD1-205ENST00000485746 SLC38A7Q9NVC3 462 aa13.68□□□□□ -0.22
PTCD1-205ENST00000485746 SEL1LQ9UBV2 794 aa13.68□□□□□ -0.22
PTCD1-205ENST00000485746 ADAM28Q9UKQ2 775 aa13.68□□□□□ -0.22
PTCD1-205ENST00000485746 BARX2Q9UMQ3 279 aaPredicted RBP13.68□□□□□ -0.22
PTCD1-205ENST00000485746 EXOC7Q9UPT5 735 aa13.68□□□□□ -0.22
PTCD1-205ENST00000485746 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.67□□□□□ -0.22
PTCD1-205ENST00000485746 PTGESO14684 152 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 CLASP2O75122 1294 aaKnown RBP13.67□□□□□ -0.22
PTCD1-205ENST00000485746 SOD2P04179 222 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 PROZP22891 400 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 LTBRP36941 435 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 ASIC1P78348 528 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 GTF2BQ00403 316 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 DLX2Q07687 328 aaPredicted RBP13.67□□□□□ -0.22
PTCD1-205ENST00000485746 MCL1Q07820 350 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 KYAT1Q16773 422 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 SEZ6Q53EL9 994 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 ZC2HC1CQ53FD0 456 aaPredicted RBP13.67□□□□□ -0.22
PTCD1-205ENST00000485746 AXDND1Q5T1B0 1012 aaPredicted RBP13.67□□□□□ -0.22
PTCD1-205ENST00000485746 ZNF720Q7Z2F6 126 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 CEP57L1Q8IYX8 460 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 SYCP3Q8IZU3 236 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 HASPINQ8TF76 798 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 CASP10Q92851 521 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 FAM212AQ96EL1 285 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 MSTO1Q9BUK6 570 aa13.67□□□□□ -0.22
PTCD1-205ENST00000485746 HERC2P3Q9BVR0 1158 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms