RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 CASTOR2A6NHX0 329 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 NARSO43776 548 aaKnown RBP21.26■□□□□ 0.99
COL27A1-205ENST00000485397 EDN1P05305 212 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 LIG1P18858 919 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 RPA1P27694 616 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 TUSC3Q13454 348 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 HSP90AA2PQ14568 343 aaPredicted RBP21.26■□□□□ 0.99
COL27A1-205ENST00000485397 ECM1Q16610 540 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 TMEM132AQ24JP5 1023 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 LILRA6Q6PI73 481 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 PRSS55Q6UWB4 352 aaPredicted RBP21.26■□□□□ 0.99
COL27A1-205ENST00000485397 CYP26C1Q6V0L0 522 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 ERMNQ8TAM6 284 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 HASPINQ8TF76 798 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 HDAC7Q8WUI4 952 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 NT5C3AQ9H0P0 336 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 C2orf40Q9H1Z8 148 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 PLEKHA4Q9H4M7 779 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 FNIP2Q9P278 1114 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 IGSF9Q9P2J2 1179 aa21.26■□□□□ 0.99
COL27A1-205ENST00000485397 PTGESO14684 152 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 N4BP3O15049 544 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 GFRA3O60609 400 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 PRKCBP05771 671 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 NPR3P17342 541 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 CLCN5P51795 746 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 PRPF4BQ13523 1007 aaKnown RBP21.25■□□□□ 0.99
COL27A1-205ENST00000485397 MAPK6Q16659 721 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 RTP2Q5QGT7 225 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 TTC38Q5R3I4 469 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 EEF1DP3Q658K8 133 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 NOSTRINQ8IVI9 506 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 GPR65Q8IYL9 337 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 STAMQ92783 540 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 KIFC3Q9BVG8 833 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 CCDC113Q9H0I3 377 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 FOXP1Q9H334 677 aaPredicted RBP21.25■□□□□ 0.99
COL27A1-205ENST00000485397 PIDD1Q9HB75 910 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 FBXL21Q9UKT6 434 aa21.25■□□□□ 0.99
COL27A1-205ENST00000485397 ACKR2O00590 384 aa21.24■□□□□ 0.99
COL27A1-205ENST00000485397 PI15O43692 258 aa21.24■□□□□ 0.99
COL27A1-205ENST00000485397 RECQL4O94761 1208 aa21.24■□□□□ 0.99
COL27A1-205ENST00000485397 KIF4AO95239 1232 aa21.24■□□□□ 0.99
COL27A1-205ENST00000485397 PAPLNO95428 1278 aa21.24■□□□□ 0.99
COL27A1-205ENST00000485397 C1RP00736 705 aa21.24■□□□□ 0.99
COL27A1-205ENST00000485397 DEPTORQ8TB45 409 aa21.24■□□□□ 0.99
COL27A1-205ENST00000485397 LLPHQ9BRT6 129 aaKnown RBP21.24■□□□□ 0.99
COL27A1-205ENST00000485397 PRKD2Q9BZL6 878 aa21.24■□□□□ 0.99
COL27A1-205ENST00000485397 EPS15L1Q9UBC2 864 aa21.24■□□□□ 0.99
COL27A1-205ENST00000485397 SF3B1O75533 1304 aaKnown RBP eCLIP21.24■□□□□ 0.99
COL27A1-205ENST00000485397 ST18O60284 1047 aa21.23■□□□□ 0.99
COL27A1-205ENST00000485397 EIF5BO60841 1220 aaKnown RBP21.23■□□□□ 0.99
COL27A1-205ENST00000485397 THP07101 528 aa21.23■□□□□ 0.99
COL27A1-205ENST00000485397 NAMPTP43490 491 aa21.23■□□□□ 0.99
COL27A1-205ENST00000485397 ORC2Q13416 577 aaPredicted RBP21.23■□□□□ 0.99
COL27A1-205ENST00000485397 NBR1Q14596 966 aa21.23■□□□□ 0.99
COL27A1-205ENST00000485397 FAM171A1Q5VUB5 890 aa21.23■□□□□ 0.99
COL27A1-205ENST00000485397 CEP57Q86XR8 500 aa21.23■□□□□ 0.99
COL27A1-205ENST00000485397 SIX5Q8N196 739 aa21.23■□□□□ 0.99
COL27A1-205ENST00000485397 C4orf32Q8N8J7 132 aa21.23■□□□□ 0.99
COL27A1-205ENST00000485397 FBXO18Q8NFZ0 1043 aa21.23■□□□□ 0.99
COL27A1-205ENST00000485397 ZDHHC7Q9NXF8 308 aa21.23■□□□□ 0.99
COL27A1-205ENST00000485397 ZMYND10O75800 440 aa21.22■□□□□ 0.99
COL27A1-205ENST00000485397 CFHP08603 1231 aa21.22■□□□□ 0.99
COL27A1-205ENST00000485397 CCT6AP40227 531 aaKnown RBP21.22■□□□□ 0.99
COL27A1-205ENST00000485397 CREMQ03060 361 aa21.22■□□□□ 0.99
COL27A1-205ENST00000485397 NAB2Q15742 525 aa21.22■□□□□ 0.99
COL27A1-205ENST00000485397 LNX1Q8TBB1 728 aaPredicted RBP21.22■□□□□ 0.99
COL27A1-205ENST00000485397 CLSTN3Q9BQT9 956 aa21.22■□□□□ 0.99
COL27A1-205ENST00000485397 ADPGKQ9BRR6 497 aa21.22■□□□□ 0.99
COL27A1-205ENST00000485397 TTPALQ9BTX7 342 aa21.22■□□□□ 0.99
COL27A1-205ENST00000485397 BHMT2Q9H2M3 363 aa21.22■□□□□ 0.99
COL27A1-205ENST00000485397 GDAQ9Y2T3 454 aa21.22■□□□□ 0.99
COL27A1-205ENST00000485397 AOC1P19801 751 aa21.21■□□□□ 0.99
COL27A1-205ENST00000485397 RBM25P49756 843 aaKnown RBP21.21■□□□□ 0.99
COL27A1-205ENST00000485397 GNL2Q13823 731 aaKnown RBP21.21■□□□□ 0.99
COL27A1-205ENST00000485397 PPP2R5AQ15172 486 aa21.21■□□□□ 0.99
COL27A1-205ENST00000485397 NT5DC1Q5TFE4 455 aa21.21■□□□□ 0.99
COL27A1-205ENST00000485397 ERICH6BQ5W0A0 696 aa21.21■□□□□ 0.99
COL27A1-205ENST00000485397 HAUS3Q68CZ6 603 aa21.21■□□□□ 0.99
COL27A1-205ENST00000485397 GET4Q7L5D6 327 aaPredicted RBP21.21■□□□□ 0.99
COL27A1-205ENST00000485397 SLC44A3Q8N4M1 653 aa21.21■□□□□ 0.99
COL27A1-205ENST00000485397 ST13P5Q8NFI4 369 aaPredicted RBP21.21■□□□□ 0.99
COL27A1-205ENST00000485397 PIK3R5Q8WYR1 880 aa21.21■□□□□ 0.99
COL27A1-205ENST00000485397 MTCL1Q9Y4B5 1905 aaKnown RBP21.2■□□□□ 0.98
COL27A1-205ENST00000485397 PROB1E7EW31 1015 aa21.2■□□□□ 0.98
COL27A1-205ENST00000485397 ADAM12O43184 909 aa21.2■□□□□ 0.98
COL27A1-205ENST00000485397 MUTP22033 750 aa21.2■□□□□ 0.98
COL27A1-205ENST00000485397 IGFBP6P24592 240 aaPredicted RBP21.2■□□□□ 0.98
COL27A1-205ENST00000485397 FXR2P51116 673 aaKnown RBP eCLIP21.2■□□□□ 0.981e-6■■□□□ 13.4
COL27A1-205ENST00000485397 PSMD5Q16401 504 aa21.2■□□□□ 0.98
COL27A1-205ENST00000485397 FAM184AQ8NB25 1140 aa21.2■□□□□ 0.98
COL27A1-205ENST00000485397 IFT74Q96LB3 600 aa21.2■□□□□ 0.98
COL27A1-205ENST00000485397 LRWD1Q9UFC0 647 aa21.2■□□□□ 0.98
COL27A1-205ENST00000485397 FBXW11Q9UKB1 542 aa21.2■□□□□ 0.98
COL27A1-205ENST00000485397 KIAA1024Q9UPX6 916 aa21.2■□□□□ 0.98
COL27A1-205ENST00000485397 DOCK8Q8NF50 2099 aa21.19■□□□□ 0.98
COL27A1-205ENST00000485397 KRBA1A5PL33 1030 aa21.19■□□□□ 0.98
COL27A1-205ENST00000485397 LAMP2P13473 410 aa21.19■□□□□ 0.98
COL27A1-205ENST00000485397 NBL1P41271 181 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms