RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 UBN2Q6ZU65 1347 aa16.02■□□□□ 0.15
RXRA-203ENST00000484822 PTGISQ16647 500 aa16.02■□□□□ 0.15
RXRA-203ENST00000484822 LRRC31Q6UY01 552 aa16.02■□□□□ 0.15
RXRA-203ENST00000484822 KIRREL3Q8IZU9 778 aa16.02■□□□□ 0.15
RXRA-203ENST00000484822 RNF217Q8TC41 542 aa16.02■□□□□ 0.15
RXRA-203ENST00000484822 ALDH8A1Q9H2A2 487 aaPredicted RBP16.02■□□□□ 0.15
RXRA-203ENST00000484822 GTPBP10A4D1E9 387 aaKnown RBP16.01■□□□□ 0.15
RXRA-203ENST00000484822 CCDC159P0C7I6 412 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 KRT4P19013 534 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 KCNA4P22459 653 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 TFDP2Q14188 446 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 LRIG3Q6UXM1 1119 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 C4orf33Q8N1A6 199 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 TEX9Q8N6V9 391 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 RUBCNQ92622 972 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 SNX25Q9H3E2 840 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 TSC22D4Q9Y3Q8 395 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 ORC4O43929 436 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 CCDC85BQ15834 202 aaPredicted RBP16.01■□□□□ 0.15
RXRA-203ENST00000484822 BZW1Q7L1Q6 419 aaKnown RBP16.01■□□□□ 0.15
RXRA-203ENST00000484822 GFM2Q969S9 779 aaKnown RBP16.01■□□□□ 0.15
RXRA-203ENST00000484822 AGPAT5Q9NUQ2 364 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 POLR1AO95602 1720 aaPredicted RBP16.01■□□□□ 0.15
RXRA-203ENST00000484822 MAP4P27816 1152 aaKnown RBP16.01■□□□□ 0.15
RXRA-203ENST00000484822 SOX5P35711 763 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 POU5F1BQ06416 359 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 STAT4Q14765 748 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 TSGA10IPQ3SY00 556 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 MFSD14CQ5VZR4 134 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 LRRC8EQ6NSJ5 796 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 ENAHQ8N8S7 591 aaPredicted RBP16.01■□□□□ 0.15
RXRA-203ENST00000484822 PRPF38AQ8NAV1 312 aaKnown RBP16.01■□□□□ 0.15
RXRA-203ENST00000484822 SEPT8Q92599 483 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 RAD54LQ92698 747 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 AURKCQ9UQB9 309 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 CAPRIN1Q14444 709 aaKnown RBP16.01■□□□□ 0.15
RXRA-203ENST00000484822 TRIP10Q15642 601 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 KRT39Q6A163 491 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 TMEM270Q6UE05 265 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 DDX42Q86XP3 938 aaKnown RBP eCLIP16.01■□□□□ 0.15
RXRA-203ENST00000484822 ANKMY2Q8IV38 441 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 C9orf72Q96LT7 481 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 ZBTB18Q99592 522 aa16.01■□□□□ 0.15
RXRA-203ENST00000484822 KLHL8Q9P2G9 620 aaPredicted RBP16.01■□□□□ 0.15
RXRA-203ENST00000484822 MARCOQ9UEW3 520 aaPredicted RBP16.01■□□□□ 0.15
RXRA-203ENST00000484822 ZBTB5O15062 677 aa16■□□□□ 0.15
RXRA-203ENST00000484822 APOA1P02647 267 aa16■□□□□ 0.15
RXRA-203ENST00000484822 ARHGAP23Q9P227 1491 aa16■□□□□ 0.15
RXRA-203ENST00000484822 PFKFB3Q16875 520 aaPredicted RBP16■□□□□ 0.15
RXRA-203ENST00000484822 STRIP1Q5VSL9 837 aa16■□□□□ 0.15
RXRA-203ENST00000484822 ANKRD40Q6AI12 368 aa16■□□□□ 0.15
RXRA-203ENST00000484822 NSUN4Q96CB9 384 aaKnown RBP16■□□□□ 0.15
RXRA-203ENST00000484822 HIC2Q96JB3 615 aa16■□□□□ 0.15
RXRA-203ENST00000484822 THTPAQ9BU02 230 aa16■□□□□ 0.15
RXRA-203ENST00000484822 FUT8Q9BYC5 575 aa16■□□□□ 0.15
RXRA-203ENST00000484822 HERC5Q9UII4 1024 aaKnown RBP16■□□□□ 0.15
RXRA-203ENST00000484822 SLC8A2Q9UPR5 921 aa16■□□□□ 0.15
RXRA-203ENST00000484822 AKT3Q9Y243 479 aa16■□□□□ 0.15
RXRA-203ENST00000484822 FHOD1Q9Y613 1164 aa16■□□□□ 0.15
RXRA-203ENST00000484822 MKRN4PQ13434 485 aaPredicted RBP16■□□□□ 0.15
RXRA-203ENST00000484822 TMEM35BQ8NCS4 154 aa16■□□□□ 0.15
RXRA-203ENST00000484822 DHX38Q92620 1227 aaKnown RBP16■□□□□ 0.15
RXRA-203ENST00000484822 PPP2R3CQ969Q6 453 aa16■□□□□ 0.15
RXRA-203ENST00000484822 KIF9Q9HAQ2 790 aa16■□□□□ 0.15
RXRA-203ENST00000484822 TBC1D23Q9NUY8 699 aa16■□□□□ 0.15
RXRA-203ENST00000484822 HOXC10Q9NYD6 342 aa16■□□□□ 0.15
RXRA-203ENST00000484822 USP17L5A8MUK1 530 aa16■□□□□ 0.15
RXRA-203ENST00000484822 CTCFP49711 727 aaPredicted RBP16■□□□□ 0.15
RXRA-203ENST00000484822 GUF1Q8N442 669 aaKnown RBP16■□□□□ 0.15
RXRA-203ENST00000484822 TEKT4Q8WW24 435 aa16■□□□□ 0.15
RXRA-203ENST00000484822 MTBPQ96DY7 904 aa16■□□□□ 0.15
RXRA-203ENST00000484822 PNKPQ96T60 521 aa16■□□□□ 0.15
RXRA-203ENST00000484822 MSTO1Q9BUK6 570 aa16■□□□□ 0.15
RXRA-203ENST00000484822 WNT8AQ9H1J5 351 aa16■□□□□ 0.15
RXRA-203ENST00000484822 POTEB3A0JP26 581 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 POTECB2RU33 542 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 AARSP49588 968 aaKnown RBP eCLIP15.99■□□□□ 0.155e-6■■■■■ 52
RXRA-203ENST00000484822 SNAP25P60880 206 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 PPP1R18Q6NYC8 613 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 POTEBQ6S5H4 581 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 XXYLT1Q8NBI6 393 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 GIMAP8Q8ND71 665 aaPredicted RBP15.99■□□□□ 0.15
RXRA-203ENST00000484822 PPP1R36Q96LQ0 422 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 LY9Q9HBG7 655 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 OLA1Q9NTK5 396 aaKnown RBP15.99■□□□□ 0.15
RXRA-203ENST00000484822 PITPNM2Q9BZ72 1349 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 RAD51CO43502 376 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 HNRNPCL1O60812 293 aaKnown RBP15.99■□□□□ 0.15
RXRA-203ENST00000484822 CHRNA5P30532 468 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 CYLC2Q14093 348 aaPredicted RBP15.99■□□□□ 0.15
RXRA-203ENST00000484822 KNOP1Q1ED39 458 aaKnown RBP15.99■□□□□ 0.15
RXRA-203ENST00000484822 MDM1Q8TC05 714 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.99■□□□□ 0.157e-7■■■■■ 66.4
RXRA-203ENST00000484822 FEM1BQ9UK73 627 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 CDH16O75309 829 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 MARK3P27448 753 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 TYK2P29597 1187 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 RCSD1Q6JBY9 416 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 SMIM5Q71RC9 77 aa15.99■□□□□ 0.15
RXRA-203ENST00000484822 SIX6OS1Q8N1H7 587 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms