RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 GLT8D2Q9H1C3 349 aa20.12■□□□□ 0.81
DDR1-245ENST00000484556 ARRDC1-AS1Q9H2J1 176 aa20.12■□□□□ 0.81
DDR1-245ENST00000484556 BRD9Q9H8M2 597 aa20.12■□□□□ 0.81
DDR1-245ENST00000484556 UBN1Q9NPG3 1134 aa20.12■□□□□ 0.81
DDR1-245ENST00000484556 MRPS23Q9Y3D9 190 aaKnown RBP20.12■□□□□ 0.81
DDR1-245ENST00000484556 COL4A3BPQ9Y5P4 624 aa20.12■□□□□ 0.81
DDR1-245ENST00000484556 AXIN1O15169 862 aa20.11■□□□□ 0.81
DDR1-245ENST00000484556 MSH4O15457 936 aa20.11■□□□□ 0.81
DDR1-245ENST00000484556 HOXA9P31269 272 aa20.11■□□□□ 0.81
DDR1-245ENST00000484556 HOXC13P31276 330 aa20.11■□□□□ 0.81
DDR1-245ENST00000484556 JAK3P52333 1124 aa20.11■□□□□ 0.81
DDR1-245ENST00000484556 FUT2Q10981 343 aa20.11■□□□□ 0.81
DDR1-245ENST00000484556 FOXC1Q12948 553 aa20.11■□□□□ 0.81
DDR1-245ENST00000484556 SLC5A9Q2M3M2 681 aa20.11■□□□□ 0.81
DDR1-245ENST00000484556 PLA2G4FQ68DD2 849 aa20.11■□□□□ 0.81
DDR1-245ENST00000484556 HASPINQ8TF76 798 aa20.11■□□□□ 0.81
DDR1-245ENST00000484556 FAM3CQ92520 227 aa20.11■□□□□ 0.81
DDR1-245ENST00000484556 SDK1Q7Z5N4 2213 aa20.1■□□□□ 0.81
DDR1-245ENST00000484556 hCG_1984214I3L0E3 225 aa20.1■□□□□ 0.81
DDR1-245ENST00000484556 GAS7O60861 476 aa20.1■□□□□ 0.81
DDR1-245ENST00000484556 SRGAP2CP0DJJ0 459 aa20.1■□□□□ 0.81
DDR1-245ENST00000484556 CEBPBP17676 345 aa20.1■□□□□ 0.81
DDR1-245ENST00000484556 SFNP31947 248 aa20.1■□□□□ 0.81
DDR1-245ENST00000484556 NUCB1Q02818 461 aa20.1■□□□□ 0.81
DDR1-245ENST00000484556 PSMD5Q16401 504 aa20.1■□□□□ 0.81
DDR1-245ENST00000484556 LONP2Q86WA8 852 aa20.1■□□□□ 0.81
DDR1-245ENST00000484556 ZNF713Q8N859 430 aaPredicted RBP20.1■□□□□ 0.81
DDR1-245ENST00000484556 CNNM3Q8NE01 707 aa20.1■□□□□ 0.81
DDR1-245ENST00000484556 EXOC6Q8TAG9 804 aa20.1■□□□□ 0.81
DDR1-245ENST00000484556 KCNH3Q9ULD8 1083 aa20.1■□□□□ 0.81
DDR1-245ENST00000484556 LHX6Q9UPM6 363 aa20.1■□□□□ 0.81
DDR1-245ENST00000484556 RBM8AQ9Y5S9 174 aaKnown RBP20.1■□□□□ 0.81
DDR1-245ENST00000484556 PDCD11Q14690 1871 aaKnown RBP20.09■□□□□ 0.81
DDR1-245ENST00000484556 SRRM3A6NNA2 597 aaPredicted RBP20.09■□□□□ 0.81
DDR1-245ENST00000484556 DDX11L8A8MPP1 907 aa20.09■□□□□ 0.81
DDR1-245ENST00000484556 NRG2O14511 850 aaPredicted RBP20.09■□□□□ 0.81
DDR1-245ENST00000484556 TADA2AO75478 443 aa20.09■□□□□ 0.81
DDR1-245ENST00000484556 FCARP24071 287 aa20.09■□□□□ 0.81
DDR1-245ENST00000484556 CNR2P34972 360 aa20.09■□□□□ 0.81
DDR1-245ENST00000484556 RING1Q06587 406 aa20.09■□□□□ 0.81
DDR1-245ENST00000484556 AXDND1Q5T1B0 1012 aaPredicted RBP20.09■□□□□ 0.81
DDR1-245ENST00000484556 LRSAM1Q6UWE0 723 aa20.09■□□□□ 0.81
DDR1-245ENST00000484556 CEP57Q86XR8 500 aa20.09■□□□□ 0.81
DDR1-245ENST00000484556 LNX1Q8TBB1 728 aaPredicted RBP20.09■□□□□ 0.81
DDR1-245ENST00000484556 ELSPBP1Q96BH3 223 aa20.09■□□□□ 0.81
DDR1-245ENST00000484556 PAAF1Q9BRP4 392 aa20.09■□□□□ 0.81
DDR1-245ENST00000484556 LSM14BQ9BX40 385 aaKnown RBP20.09■□□□□ 0.81
DDR1-245ENST00000484556 TEKT3Q9BXF9 490 aa20.09■□□□□ 0.81
DDR1-245ENST00000484556 TMEM121BQ9BXQ6 578 aaPredicted RBP20.09■□□□□ 0.81
DDR1-245ENST00000484556 SMOC1Q9H4F8 434 aa20.09■□□□□ 0.81
DDR1-245ENST00000484556 BMP2KQ9NSY1 1161 aaPredicted RBP20.09■□□□□ 0.81
DDR1-245ENST00000484556 PIAS3Q9Y6X2 628 aa20.09■□□□□ 0.81
DDR1-245ENST00000484556 VWA8A3KMH1 1905 aa20.09■□□□□ 0.81
DDR1-245ENST00000484556 AKAP13Q12802 2813 aa20.08■□□□□ 0.81
DDR1-245ENST00000484556 SF3B1O75533 1304 aaKnown RBP eCLIP20.08■□□□□ 0.81
DDR1-245ENST00000484556 NBEAQ8NFP9 2946 aa20.08■□□□□ 0.81
DDR1-245ENST00000484556 K7ESF4 209 aa20.08■□□□□ 0.81
DDR1-245ENST00000484556 CHRNB1P11230 501 aa20.08■□□□□ 0.81
DDR1-245ENST00000484556 GSPT1P15170 499 aaKnown RBP20.08■□□□□ 0.81
DDR1-245ENST00000484556 LRCH2Q5VUJ6 765 aa20.08■□□□□ 0.81
DDR1-245ENST00000484556 MIER3Q7Z3K6 550 aa20.08■□□□□ 0.81
DDR1-245ENST00000484556 SRGAP1Q7Z6B7 1085 aa20.08■□□□□ 0.81
DDR1-245ENST00000484556 CPB2Q96IY4 423 aa20.08■□□□□ 0.81
DDR1-245ENST00000484556 NXF3Q9H4D5 531 aaKnown RBP20.08■□□□□ 0.81
DDR1-245ENST00000484556 RBM12Q9NTZ6 932 aaKnown RBP20.08■□□□□ 0.81
DDR1-245ENST00000484556 GIPC1O14908 333 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 TOP3BO95985 862 aaKnown RBP20.07■□□□□ 0.8
DDR1-245ENST00000484556 RHOP08100 348 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 ZNF806P0C7X5 589 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 AKAP5P24588 427 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 CIITAP33076 1130 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 RTN1Q16799 776 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 FAM171A1Q5VUB5 890 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 ANO5Q75V66 913 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 REXO1Q8N1G1 1221 aaKnown RBP20.07■□□□□ 0.8
DDR1-245ENST00000484556 GSTCDQ8NEC7 633 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 PRPF31Q8WWY3 499 aaKnown RBP20.07■□□□□ 0.8
DDR1-245ENST00000484556 RUFY2Q8WXA3 655 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 PIK3R5Q8WYR1 880 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 SLC5A5Q92911 643 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 TMEM143Q96AN5 459 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 RIT2Q99578 217 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 TTPALQ9BTX7 342 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 RBM28Q9NW13 759 aaKnown RBP20.07■□□□□ 0.8
DDR1-245ENST00000484556 C2orf42Q9NWW7 574 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 GDE1Q9NZC3 331 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 LAMA1P25391 3075 aa20.07■□□□□ 0.8
DDR1-245ENST00000484556 GCN1Q92616 2671 aaKnown RBP20.07■□□□□ 0.8
DDR1-245ENST00000484556 SPAG17Q6Q759 2223 aa20.06■□□□□ 0.8
DDR1-245ENST00000484556 TSPAN1O60635 241 aa20.06■□□□□ 0.8
DDR1-245ENST00000484556 ERLIN2O94905 339 aa20.06■□□□□ 0.8
DDR1-245ENST00000484556 POU2F2P09086 479 aa20.06■□□□□ 0.8
DDR1-245ENST00000484556 CHMLP26374 656 aa20.06■□□□□ 0.8
DDR1-245ENST00000484556 NOVA1P51513 510 aaKnown RBP20.06■□□□□ 0.8
DDR1-245ENST00000484556 HSP90AA2PQ14568 343 aaPredicted RBP20.06■□□□□ 0.8
DDR1-245ENST00000484556 APOA5Q6Q788 366 aa20.06■□□□□ 0.8
DDR1-245ENST00000484556 SYNE3Q6ZMZ3 975 aa20.06■□□□□ 0.8
DDR1-245ENST00000484556 Q6ZS52 159 aa20.06■□□□□ 0.8
DDR1-245ENST00000484556 SGMS1Q86VZ5 419 aa20.06■□□□□ 0.8
DDR1-245ENST00000484556 SPEM1Q8N4L4 309 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms