RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 IL17AQ16552 155 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 PALB2Q86YC2 1186 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 ST13P5Q8NFI4 369 aaPredicted RBP11.04□□□□□ -0.64
CPSF4-213ENST00000484112 PIGOQ8TEQ8 1089 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 PRPF31Q8WWY3 499 aaKnown RBP11.04□□□□□ -0.64
CPSF4-213ENST00000484112 STAMQ92783 540 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 TMEM143Q96AN5 459 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 HINFPQ9BQA5 517 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 PIDD1Q9HB75 910 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 IFT122Q9HBG6 1241 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 FOXD4L1Q9NU39 408 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 AGPAT5Q9NUQ2 364 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 DDX19AQ9NUU7 478 aaKnown RBP11.04□□□□□ -0.64
CPSF4-213ENST00000484112 WNT16Q9UBV4 365 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 STK39Q9UEW8 545 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 KIAA1024Q9UPX6 916 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 SRPRBQ9Y5M8 271 aaKnown RBP11.04□□□□□ -0.64
CPSF4-213ENST00000484112 R4GN57 208 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 PHLPP2Q6ZVD8 1323 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 KRBA1A5PL33 1030 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 ZBTB39O15060 712 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 TEX28O15482 410 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 PPP6R2O75170 966 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 RFPL2O75678 378 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 YEATS4O95619 227 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 GLUD1P00367 558 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 F13A1P00488 732 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 LMNAP02545 664 aaKnown RBP11.03□□□□□ -0.64
CPSF4-213ENST00000484112 ADH1AP07327 375 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 ITGA4P13612 1032 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 LAMTOR4Q0VGL1 99 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 SLC39A14Q15043 492 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 PPP2R5AQ15172 486 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 UBXN11Q5T124 520 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 ELMSAN1Q6PJG2 1045 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 PADI6Q6TGC4 694 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 MRPL10Q7Z7H8 261 aaKnown RBP11.03□□□□□ -0.64
CPSF4-213ENST00000484112 GLYCTKQ8IVS8 523 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 SLC44A3Q8N4M1 653 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
CPSF4-213ENST00000484112 SMG7Q92540 1137 aaKnown RBP11.03□□□□□ -0.64
CPSF4-213ENST00000484112 KIFAP3Q92845 792 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 CALML4Q96GE6 196 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 CDK5RAP3Q96JB5 506 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 RPS6KC1Q96S38 1066 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 MYADMQ96S97 322 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 MMTAG2Q9BU76 263 aaKnown RBP11.03□□□□□ -0.64
CPSF4-213ENST00000484112 HERC2P3Q9BVR0 1158 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 APOL6Q9BWW8 343 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 CCSER1Q9C0I3 900 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 MINDY3Q9H8M7 445 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 TBC1D17Q9HA65 648 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 C17orf75Q9HAS0 396 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 WDR6Q9NNW5 1121 aaKnown RBP11.03□□□□□ -0.64
CPSF4-213ENST00000484112 XPNPEP1Q9NQW7 623 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 MARCH5Q9NX47 278 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 DPP7Q9UHL4 492 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 CFAP45Q9UL16 551 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 SSX2IPQ9Y2D8 614 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 ATP6V1DQ9Y5K8 247 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 CLUHO75153 1309 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 CNTNAP2Q9UHC6 1331 aa11.03□□□□□ -0.64
CPSF4-213ENST00000484112 DCNP07585 359 aaKnown RBP11.02□□□□□ -0.65
CPSF4-213ENST00000484112 SCP2P22307 547 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 AXLP30530 894 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 HOXA11P31270 313 aaPredicted RBP11.02□□□□□ -0.65
CPSF4-213ENST00000484112 TXLNAP40222 546 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 GLUD2P49448 558 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 PTENP60484 403 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 NCBP1Q09161 790 aaKnown RBP11.02□□□□□ -0.65
CPSF4-213ENST00000484112 GET4Q7L5D6 327 aaPredicted RBP11.02□□□□□ -0.65
CPSF4-213ENST00000484112 COLGALT2Q8IYK4 626 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 KIAA2013Q8IYS2 634 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 KRI1Q8N9T8 703 aaKnown RBP11.02□□□□□ -0.65
CPSF4-213ENST00000484112 CMASQ8NFW8 434 aaPredicted RBP11.02□□□□□ -0.65
CPSF4-213ENST00000484112 GPR152Q8TDT2 470 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 CCDC51Q96ER9 411 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 B3GALT6Q96L58 329 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 PRIMPOLQ96LW4 560 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 GAD1Q99259 594 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 C2orf40Q9H1Z8 148 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 BHMT2Q9H2M3 363 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 CCDC39Q9UFE4 941 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 CLIC4Q9Y696 253 aa11.02□□□□□ -0.65
CPSF4-213ENST00000484112 F8W810 466 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 USO1O60763 962 aaKnown RBP11.01□□□□□ -0.65
CPSF4-213ENST00000484112 NR1I2O75469 434 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 ERLIN2O94905 339 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 SRFP11831 508 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 NCLP19338 710 aaKnown RBP11.01□□□□□ -0.65
CPSF4-213ENST00000484112 GUCY2CP25092 1073 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 MLH1P40692 756 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 SCNN1GP51170 649 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 ECM1Q16610 540 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 TMEM119Q4V9L6 283 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 KIAA0319Q5VV43 1072 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 SYT2Q8N9I0 419 aaPredicted RBP11.01□□□□□ -0.65
CPSF4-213ENST00000484112 RNF149Q8NC42 400 aa11.01□□□□□ -0.65
CPSF4-213ENST00000484112 LINC00301Q8NCQ3 95 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms