RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 CCDC148Q8NFR7 591 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 HASPINQ8TF76 798 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 ING5Q8WYH8 240 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 CEP170P1Q96L14 293 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 PLA2G2FQ9BZM2 168 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 CSRNP2Q9H175 543 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 KLK14Q9P0G3 267 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 ARID2Q68CP9 1835 aa12.13□□□□□ -0.47
SMARCC1-205ENST00000483847 CCDC196A0A1B0GTZ2 297 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 ZBTB39O15060 712 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 HNRNPA1P09651 372 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 TDGF1P13385 188 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 RPS9P46781 194 aaKnown RBP12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 QARSP47897 775 aaKnown RBP12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 PFKPQ01813 784 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 CREMQ03060 361 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 EMC2Q15006 297 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 AMHR2Q16671 573 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 LIN9Q5TKA1 542 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 NOTUMQ6P988 496 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 FERMT3Q86UX7 667 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 LNX1Q8TBB1 728 aaPredicted RBP12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 BRF1Q92994 677 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 CHAMP1Q96JM3 812 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 SLC26A6Q9BXS9 759 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 HEBP1Q9NRV9 189 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 GMEB2Q9UKD1 530 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 VAV3Q9UKW4 847 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 GIT1Q9Y2X7 761 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 NID2Q14112 1375 aa12.12□□□□□ -0.47
SMARCC1-205ENST00000483847 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 SLC30A4O14863 429 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 B4GALT5O43286 388 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 SLC37A4O43826 429 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 TADA2AO75478 443 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 ARF4P18085 180 aaPredicted RBP12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 RFC5P40937 340 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 NLRP5P59047 1200 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 PTENP60484 403 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 FGD1P98174 961 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 AKAP17AQ02040 695 aaKnown RBP12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 HSP90AA2PQ14568 343 aaPredicted RBP12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 PSMD5Q16401 504 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 TSGA10IPQ3SY00 556 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 FAM171A1Q5VUB5 890 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 Q6ZUG5 572 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 CEP57Q86XR8 500 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 ZNF687Q8N1G0 1237 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 SLC7A14Q8TBB6 771 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 PIK3R5Q8WYR1 880 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 CCDC51Q96ER9 411 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 NELL2Q99435 816 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 RNF26Q9BY78 433 aaPredicted RBP12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 XPNPEP1Q9NQW7 623 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 DNMT3BQ9UBC3 853 aaKnown RBP12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 VWA8A3KMH1 1905 aa12.11□□□□□ -0.47
SMARCC1-205ENST00000483847 SF3B1O75533 1304 aaKnown RBP eCLIP12.11□□□□□ -0.475e-6■■■■■ 114.9
SMARCC1-205ENST00000483847 ATRXP46100 2492 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 CASTOR2A6NHX0 329 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 INO80B-WBP1J3KQ70 363 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 ASAP2O43150 1006 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 XYLBO75191 536 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 KIF4AO95239 1232 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 NPTXRO95502 500 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 AXLP30530 894 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 HOXA9P31269 272 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 MBTD1Q05BQ5 628 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 ADCY1Q08828 1119 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 GRIK3Q13003 919 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 PPP2R5CQ13362 524 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 SLC5A9Q2M3M2 681 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 PABPC1LQ4VXU2 614 aaKnown RBP12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 AXDND1Q5T1B0 1012 aaPredicted RBP12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 ZNF852Q6ZMS4 543 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 NETO1Q8TDF5 533 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 TCP11Q8WWU5 503 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 MCRS1Q96EZ8 462 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 TTPALQ9BTX7 342 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 FAM126AQ9BYI3 521 aaPredicted RBP12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 TRIM6Q9C030 488 aaPredicted RBP12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 CXCL16Q9H2A7 254 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 SLKQ9H2G2 1235 aaPredicted RBP12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 NCOA5Q9HCD5 579 aaKnown RBP12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 RGL1Q9NZL6 768 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 DDX25Q9UHL0 483 aaKnown RBP12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 NDRG2Q9UN36 371 aaKnown RBP12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 PCDHA4Q9UN74 947 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 COL4A2P08572 1712 aa12.1□□□□□ -0.47
SMARCC1-205ENST00000483847 M0R2N6 131 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 NRG2O14511 850 aaPredicted RBP12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 NCAM2O15394 837 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 ZZEF1O43149 2961 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 GDF9O60383 454 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 ECI2O75521 394 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 IFNAR1P17181 557 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 IGFBP6P24592 240 aaPredicted RBP12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 YWHABP31946 246 aaKnown RBP12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 CAPSQ13938 189 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 NPY5RQ15761 445 aa12.09□□□□□ -0.47
SMARCC1-205ENST00000483847 XKR9Q5GH70 373 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms