RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 FAM189A1O60320 539 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 N4BP1O75113 896 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 HARSP12081 509 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 INSRRP14616 1297 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 FERP16591 822 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 CXCR5P32302 372 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 TNFSF9P41273 254 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 CHMP4BP1P59074 171 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 CLDN10P78369 228 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 CETN1Q12798 172 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 LAMC2Q13753 1193 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 TEX35Q5T0J7 233 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 IER5Q5VY09 327 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 CDCA2Q69YH5 1023 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 EFCAB12Q6NXP0 572 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 CDR2LQ86X02 465 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 NOA1Q8NC60 698 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 PPP1R13LQ8WUF5 828 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 DHX38Q92620 1227 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 CAPZA3Q96KX2 299 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 MMS19Q96T76 1030 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 TINF2Q9BSI4 451 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 TLR10Q9BXR5 811 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 TMEM134Q9H6X4 195 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 VTA1Q9NP79 307 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 RAB20Q9NX57 234 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 ERAP1Q9NZ08 941 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 SUCLA2Q9P2R7 463 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 JRKLQ9Y4A0 524 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 PLXNA1Q9UIW2 1896 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 PLXNB2O15031 1838 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 TMCO5BA8MYB1 307 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 ABLIM1O14639 778 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 B4GALT5O43286 388 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 PALMO75781 387 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 C22orf31O95567 290 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 CALCAP01258 141 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 SLC26A2P50443 739 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 GPC3P51654 580 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 NAP1L1P55209 391 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 BMS1Q14692 1282 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 TDRD10Q5VZ19 366 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 NFRKBQ6P4R8 1299 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 PLEKHH3Q7Z736 793 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 ZNF467Q7Z7K2 595 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 PDCL2Q8N4E4 241 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 FBXL13Q8NEE6 735 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 PPTC7Q8NI37 304 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 U2AF1L4Q8WU68 220 aaKnown RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 NLRP4Q96MN2 994 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 NOX5Q96PH1 765 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 PPP1R16BQ96T49 567 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 MSTO1Q9BUK6 570 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 FLRT1Q9NZU1 646 aa9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 PACSIN2Q9UNF0 486 aaPredicted RBP9.56□□□□□ -0.88
CDC42SE1-204ENST00000483763 CNTNAP2Q9UHC6 1331 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 ANO9A1A5B4 782 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 GRID2IPA4D2P6 1211 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 CYP26A1O43174 497 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 HBP1O60381 514 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 TACC1O75410 805 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 GH1P01241 217 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 C4BPAP04003 597 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 H2AFXP16104 143 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 ACVR2BQ13705 512 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 KIF22Q14807 665 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 ZBTB33Q86T24 672 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 SLC47A2Q86VL8 602 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 IFNL1Q8IU54 200 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 CREG2Q8IUH2 290 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 PLCD3Q8N3E9 789 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 RNF10Q8N5U6 811 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 OR5B17Q8NGF7 314 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 LENG1Q96BZ8 264 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 HHIPL1Q96JK4 782 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 IFT122Q9HBG6 1241 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 ZNF446Q9NWS9 450 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 RBAKQ9NYW8 714 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 SMARCAL1Q9NZC9 954 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 SNX12Q9UMY4 172 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 PCDHGC5Q9Y5F6 944 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 CLDN3O15551 220 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 SGPL1O95470 568 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 VNN1O95497 513 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 FTCDO95954 541 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 TNNI1P19237 187 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 USP8P40818 1118 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 MXD4Q14582 209 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 PSMD6Q15008 389 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 PTPROQ16827 1216 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 WHAMMP3Q1A5X7 153 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 ZACNQ401N2 412 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 SPOPLQ6IQ16 392 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 FAM71AQ8IYT1 594 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 EPS8L1Q8TE68 723 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 SHC3Q92529 594 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 EMID1Q96A84 441 aaPredicted RBP9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 ACO2Q99798 780 aaKnown RBP9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 SLC24A3Q9HC58 644 aa9.55□□□□□ -0.88
CDC42SE1-204ENST00000483763 EHD2Q9NZN4 543 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms