RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 NOCTQ9UK39 431 aaKnown RBP14.29□□□□□ -0.12
CPNE1-225ENST00000483495 TRPC6Q9Y210 931 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 PLXNA1Q9UIW2 1896 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 CNTNAP2Q9UHC6 1331 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 ASAP2O43150 1006 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 NCK2O43639 380 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 ZRANB2O95218 330 aaKnown RBP eCLIP14.29□□□□□ -0.12
CPNE1-225ENST00000483495 C22orf31O95567 290 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 BRD3Q15059 726 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 SLFN11Q7Z7L1 901 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 DNAAF5Q86Y56 855 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 LRRC71Q8N4P6 559 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 RNF149Q8NC42 400 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 TPCN2Q8NHX9 752 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 EPS8L1Q8TE68 723 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 SLC20A1Q8WUM9 679 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 CGRRF1Q99675 332 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 ACO2Q99798 780 aaKnown RBP14.29□□□□□ -0.12
CPNE1-225ENST00000483495 NFKBIZQ9BYH8 718 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 RNPEPQ9H4A4 650 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 PDE11AQ9HCR9 933 aa14.29□□□□□ -0.12
CPNE1-225ENST00000483495 CCDC151A5D8V7 595 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 ANKRD62A6NC57 917 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 SLC15A5A6NIM6 579 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 TTLL13PA6NNM8 815 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 ABLIM1O14639 778 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 CLDN3O15551 220 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 PRKCBP05771 671 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 SRGAP2CP0DJJ0 459 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 HOXD8P13378 290 aaPredicted RBP14.28□□□□□ -0.12
CPNE1-225ENST00000483495 POU5F1BQ06416 359 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 MCL1Q07820 350 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 GRM1Q13255 1194 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 TFDP1Q14186 410 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 TCEAL1Q15170 157 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 MAPK6Q16659 721 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 ZBTB41Q5SVQ8 909 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 GJC2Q5T442 439 aaPredicted RBP14.28□□□□□ -0.12
CPNE1-225ENST00000483495 TDRD10Q5VZ19 366 aaKnown RBP14.28□□□□□ -0.12
CPNE1-225ENST00000483495 DPP9Q86TI2 863 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 PALB2Q86YC2 1186 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 MSL3Q8N5Y2 521 aaKnown RBP14.28□□□□□ -0.12
CPNE1-225ENST00000483495 LINC01465Q8N7H1 131 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 CAGE1Q8TC20 777 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 LMBR1Q8WVP7 490 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 TRAPPC12Q8WVT3 735 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 RFFLQ8WZ73 363 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 ISCUQ9H1K1 167 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 FZD8Q9H461 694 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 ANKFY1Q9P2R3 1169 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 ZNF236Q9UL36 1845 aa14.28□□□□□ -0.12
CPNE1-225ENST00000483495 CES2O00748 559 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 PPFIA4O75335 1185 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 SGPL1O95470 568 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 FTCDO95954 541 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 ITGBL1O95965 494 aaPredicted RBP14.27□□□□□ -0.12
CPNE1-225ENST00000483495 CHRNB2P17787 502 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 TNNI1P19237 187 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 PROZP22891 400 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 ADCYAP1R1P41586 468 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 EFCAB12Q6NXP0 572 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 TMCO3Q6UWJ1 677 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 NOP9Q86U38 636 aaKnown RBP14.27□□□□□ -0.12
CPNE1-225ENST00000483495 BRSK2Q8IWQ3 736 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 AFG1LQ8WV93 481 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 HNRNPLLQ8WVV9 542 aaKnown RBP14.27□□□□□ -0.12
CPNE1-225ENST00000483495 TATDN2Q93075 761 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 PNKPQ96T60 521 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 ZCCHC17Q9NP64 241 aaKnown RBP14.27□□□□□ -0.12
CPNE1-225ENST00000483495 TAS2R14Q9NYV8 317 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 MYH10P35580 1976 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 PTPRJQ12913 1337 aa14.27□□□□□ -0.12
CPNE1-225ENST00000483495 COL1A2P08123 1366 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 ACKR2O00590 384 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 MAGEB2O15479 319 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 CYP26A1O43174 497 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 VNN1O95497 513 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 HLA-DRAP01903 254 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 GZMAP12544 262 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 INSRRP14616 1297 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 NOP2P46087 812 aaKnown RBP14.27□□□□□ -0.13
CPNE1-225ENST00000483495 PTENP60484 403 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 IRF5Q13568 498 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 DUSP28Q4G0W2 176 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 CC2D1AQ6P1N0 951 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-225ENST00000483495 WDR93Q6P2C0 686 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 TSHZ1Q6ZSZ6 1077 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 RHPN2Q8IUC4 686 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 RPUSD2Q8IZ73 545 aaKnown RBP14.27□□□□□ -0.13
CPNE1-225ENST00000483495 MMGT1Q8N4V1 131 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 CTNNBL1Q8WYA6 563 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-225ENST00000483495 CALR3Q96L12 384 aaKnown RBP14.27□□□□□ -0.13
CPNE1-225ENST00000483495 TINF2Q9BSI4 451 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 C16orf70Q9BSU1 422 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 ABHD16BQ9H3Z7 469 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 PTPRHQ9HD43 1115 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 C1orf112Q9NSG2 853 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 FAM53CQ9NYF3 392 aa14.27□□□□□ -0.13
CPNE1-225ENST00000483495 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-225ENST00000483495 TARSL2A2RTX5 802 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms