RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ZBTB10Q96DT7 871 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 CDCA3Q99618 268 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-207ENST00000483407 OSMRQ99650 979 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 PRRX2Q99811 253 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 ANO3Q9BYT9 981 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 TLE6Q9H808 572 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 LIN7BQ9HAP6 207 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 RIC8AQ9NPQ8 531 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 DZANK1Q9NVP4 752 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 TCEAL9Q9UHQ7 104 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 PPM1HQ9ULR3 514 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 CACNA1GO43497 2377 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 MYH6P13533 1939 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 TMEM238LA0A1B0GVL6 79 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 TBKBP1A7MCY6 615 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 DDX39AO00148 427 aaKnown RBP6.65□□□□□ -1.34
CSDE1-207ENST00000483407 MEIS1O00470 390 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 ARP10275 920 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 KLRC1P26715 233 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 KCNMA1Q12791 1236 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 ITGB3BPQ13352 177 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-207ENST00000483407 ZNF484Q5JVG2 852 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 CREB3L3Q68CJ9 461 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 WWC2Q6AWC2 1192 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 FOXR1Q6PIV2 292 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 SLC24A5Q71RS6 500 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 NIPA1Q7RTP0 329 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 CKAP2LQ8IYA6 745 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 THNSL1Q8IYQ7 743 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 CYP2W1Q8TAV3 490 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 ATP8B4Q8TF62 1192 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 PGBD1Q96JS3 809 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 NEK1Q96PY6 1258 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 ADAM2Q99965 735 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 PHF7Q9BWX1 381 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-207ENST00000483407 LRRC2Q9BYS8 371 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 LSG1Q9H089 658 aaKnown RBP6.65□□□□□ -1.34
CSDE1-207ENST00000483407 TMX1Q9H3N1 280 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 ZFYVE1Q9HBF4 777 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 ATP6V0A4Q9HBG4 840 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 CAPN10Q9HC96 672 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 AGO4Q9HCK5 861 aaKnown RBP6.65□□□□□ -1.34
CSDE1-207ENST00000483407 ERVK-5Q9HDB9 667 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 ZNF302Q9NR11 478 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 TLR9Q9NR96 1032 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 RGS18Q9NS28 235 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 CLEC1BQ9P126 229 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 PUF60Q9UHX1 559 aaKnown RBP6.65□□□□□ -1.34
CSDE1-207ENST00000483407 BARX2Q9UMQ3 279 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-207ENST00000483407 CEP131Q9UPN4 1083 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 USP15Q9Y4E8 981 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-207ENST00000483407 PCDHGB7Q9Y5F8 929 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 MYH7BA7E2Y1 1941 aa6.65□□□□□ -1.34
CSDE1-207ENST00000483407 COL1A2P08123 1366 aa6.65□□□□□ -1.35
CSDE1-207ENST00000483407 MUC6Q6W4X9 2439 aa6.65□□□□□ -1.35
CSDE1-207ENST00000483407 BAZ2BQ9UIF8 2168 aaKnown RBP6.64□□□□□ -1.35
CSDE1-207ENST00000483407 IGKV6D-21A0A0A0MT36 114 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 SMCO2A6NFE2 343 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 TMEM221A6NGB7 291 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 ZBTB42B2RXF5 422 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 LOC730098B7Z3J9 87 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 C9IYK1 514 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 M0R296 226 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 PER2O15055 1255 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 ZBTB43O43298 467 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 FGF18O76093 207 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 GLP2RO95838 553 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 ATF7P17544 494 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-207ENST00000483407 LAG3P18627 525 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 SREBF1P36956 1147 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 GMPRP36959 345 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 GATMP50440 423 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 CRYBB1P53674 252 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-207ENST00000483407 GPLD1P80108 840 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 ZXDAP98168 799 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 SETQ01105 290 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-207ENST00000483407 CTBSQ01459 385 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 GNL2Q13823 731 aaKnown RBP6.64□□□□□ -1.35
CSDE1-207ENST00000483407 CBX2Q14781 532 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-207ENST00000483407 NECTIN1Q15223 517 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 MCTP2Q6DN12 878 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 APOA5Q6Q788 366 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 ABHD15Q6UXT9 468 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 PLA2G4DQ86XP0 818 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 KIAA0319LQ8IZA0 1049 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 ABI1Q8IZP0 508 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 METTL13Q8N6R0 699 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 TMEM102Q8N9M5 508 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-207ENST00000483407 COLGALT1Q8NBJ5 622 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 NANOS1Q8WY41 292 aaKnown RBP6.64□□□□□ -1.35
CSDE1-207ENST00000483407 UBXN4Q92575 508 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 RPGRIP1Q96KN7 1286 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 MAP7D2Q96T17 732 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 RSRP1Q9BUV0 290 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 OXCT2Q9BYC2 517 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-207ENST00000483407 BHLHE41Q9C0J9 482 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-207ENST00000483407 ELAC1Q9H777 363 aaKnown RBP6.64□□□□□ -1.35
CSDE1-207ENST00000483407 TYW1Q9NV66 732 aaKnown RBP6.64□□□□□ -1.35
CSDE1-207ENST00000483407 TMEM161AQ9NX61 479 aa6.64□□□□□ -1.35
CSDE1-207ENST00000483407 TMEM260Q9NX78 707 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms