RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 MED1Q15648 1581 aaPredicted RBP8.32□□□□□ -1.08
COL4A5-205ENST00000483338 NALCNQ8IZF0 1738 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 RASGRF2O14827 1237 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 NKRFO15226 690 aaKnown RBP eCLIP8.32□□□□□ -1.08
COL4A5-205ENST00000483338 ADCY6O43306 1168 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 USP1O94782 785 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 PTPN2P17706 415 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 KLRC1P26715 233 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 PPP1R2P41236 205 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 MOGSQ13724 837 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 PRKG1Q13976 671 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 ACAP1Q15027 740 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 PPP1R2P3Q6NXS1 205 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 DCDC5Q6ZRR9 648 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 RFPL4BQ6ZWI9 263 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 RAPH1Q70E73 1250 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 PPP1R14CQ8TAE6 165 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 ACTRT1Q8TDG2 376 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 PTCD2Q8WV60 388 aaKnown RBP8.32□□□□□ -1.08
COL4A5-205ENST00000483338 TUBGCP2Q9BSJ2 902 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 DSCC1Q9BVC3 393 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 TMEM109Q9BVC6 243 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 STMN4Q9H169 189 aaPredicted RBP8.32□□□□□ -1.08
COL4A5-205ENST00000483338 SIAEQ9HAT2 523 aa8.32□□□□□ -1.08
COL4A5-205ENST00000483338 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.32□□□□□ -1.08
COL4A5-205ENST00000483338 DDX60Q8IY21 1712 aaKnown RBP8.32□□□□□ -1.08
COL4A5-205ENST00000483338 KRIT1O00522 736 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 NDC80O14777 642 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 BUD23O43709 281 aaKnown RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 DCTN3O75935 186 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 PHBP35232 272 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 ERFP50548 548 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 GPC3P51654 580 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 KLRC3Q07444 240 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 PHKG1Q16816 387 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 DCAF6Q58WW2 860 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 TMTC4Q5T4D3 741 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 KAZNQ674X7 775 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 SIGIRRQ6IA17 410 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 UGT2A3Q6UWM9 527 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 MAMSTRQ6ZN01 415 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 UBE2Q1Q7Z7E8 422 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 GABPB2Q8TAK5 448 aaPredicted RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 MAGEB18Q96M61 343 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 BTBD10Q9BSF8 475 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 GRIP2Q9C0E4 1043 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 KLHL4Q9C0H6 718 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 B3GNT4Q9C0J1 378 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 KCNK9Q9NPC2 374 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 UVRAGQ9P2Y5 699 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 ZBTB21Q9ULJ3 1066 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 TRAF3IP3Q9Y228 551 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 NOC2LQ9Y3T9 749 aaKnown RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 USP31Q70CQ4 1352 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 CHD4Q14839 1912 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 CES2O00748 559 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 TBCAO75347 108 aaKnown RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 CLPTM1O96005 669 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 LDHBP07195 334 aaKnown RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 OCM2P0CE71 109 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 OCMP0CE72 109 aaPredicted RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 HSPD1P10809 573 aaKnown RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 RXRAP19793 462 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 PRKACBP22694 351 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 IL4RP24394 825 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 GSSP48637 474 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 CHN2P52757 468 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 VCPP55072 806 aaKnown RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 ANTXR2P58335 489 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 DLG1Q12959 904 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 ZBTB17Q13105 803 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 SF3B4Q15427 424 aaKnown RBP eCLIP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 NAB2Q15742 525 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 FIGNQ5HY92 759 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 MFSD5Q6N075 450 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 BTNL9Q6UXG8 535 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 BARGINQ6ZT62 677 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 PDSS2Q86YH6 399 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 OR6Y1Q8NGX8 325 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 ACTRT2Q8TDY3 377 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 SYMPKQ92797 1274 aaKnown RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 GPATCH1Q9BRR8 931 aaKnown RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 LRRC27Q9C0I9 530 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 SNX25Q9H3E2 840 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 EHD1Q9H4M9 534 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 CNOT7Q9UIV1 285 aaKnown RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 STRCP1A6NGW2 1772 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 RGPD8O14715 1765 aaPredicted RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 TMEM114B3SHH9 223 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 K7EPI3 171 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 AP1G1O43747 822 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 DNAJC6O75061 913 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 CNOT3O75175 753 aaKnown RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 STX2P32856 288 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 ACADSBP45954 432 aa8.31□□□□□ -1.08
COL4A5-205ENST00000483338 POLR2FP61218 127 aaKnown RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 POU5F1Q01860 360 aaKnown RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 ZNF658Q5TYW1 1059 aaPredicted RBP8.31□□□□□ -1.08
COL4A5-205ENST00000483338 ISLR2Q6UXK2 745 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms