RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 RFX1P22670 979 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 GUCY1B3Q02153 619 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 NCBP1Q09161 790 aaKnown RBP15.42■□□□□ 0.06
VARS-226ENST00000483275 GRIK3Q13003 919 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 SPECC1Q5M775 1068 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 DIS3L2Q8IYB7 885 aaKnown RBP15.42■□□□□ 0.06
VARS-226ENST00000483275 NSUN7Q8NE18 718 aaKnown RBP15.42■□□□□ 0.06
VARS-226ENST00000483275 GTF3C6Q969F1 213 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 NKD2Q969F2 451 aaPredicted RBP15.42■□□□□ 0.06
VARS-226ENST00000483275 NT5C3AQ9H0P0 336 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 TBC1D17Q9HA65 648 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 POLD4Q9HCU8 107 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 BRMS1Q9HCU9 246 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 ANKEF1Q9NU02 776 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 EPS15L1Q9UBC2 864 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 NOTCH4Q99466 2003 aa15.42■□□□□ 0.06
VARS-226ENST00000483275 CACNA1AO00555 2505 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 ADAM12O43184 909 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 MED24O75448 989 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 NR1I2O75469 434 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 SPATA31C1P0DKV0 1188 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 IGFBP6P24592 240 aaPredicted RBP15.41■□□□□ 0.06
VARS-226ENST00000483275 ST3GAL1Q11201 340 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 HSP90AA2PQ14568 343 aaPredicted RBP15.41■□□□□ 0.06
VARS-226ENST00000483275 USP41Q3LFD5 358 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 CEP57Q86XR8 500 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 HACE1Q8IYU2 909 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 ADSSL1Q8N142 457 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 SLC44A3Q8N4M1 653 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 GPR152Q8TDT2 470 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 WASF1Q92558 559 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 STAMQ92783 540 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 RPP25Q9BUL9 199 aaKnown RBP15.41■□□□□ 0.06
VARS-226ENST00000483275 KIFC3Q9BVG8 833 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 PDZD7Q9H5P4 517 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 IGSF9Q9P2J2 1179 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 SSX2IPQ9Y2D8 614 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 NUMBLQ9Y6R0 609 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 CACNA1IQ9P0X4 2223 aa15.41■□□□□ 0.06
VARS-226ENST00000483275 A0A1B0GUA9 196 aa15.4■□□□□ 0.06
VARS-226ENST00000483275 PTGESO14684 152 aa15.4■□□□□ 0.06
VARS-226ENST00000483275 TADA2AO75478 443 aa15.4■□□□□ 0.06
VARS-226ENST00000483275 RECQL4O94761 1208 aa15.4■□□□□ 0.06
VARS-226ENST00000483275 DCNP07585 359 aaKnown RBP15.4■□□□□ 0.06
VARS-226ENST00000483275 MCM7P33993 719 aa15.4■□□□□ 0.06
VARS-226ENST00000483275 HTR4Q13639 388 aa15.4■□□□□ 0.06
VARS-226ENST00000483275 PCBP1Q15365 356 aaKnown RBP eCLIP15.4■□□□□ 0.066e-7■■■■□ 21.8
VARS-226ENST00000483275 TMEM132AQ24JP5 1023 aa15.4■□□□□ 0.06
VARS-226ENST00000483275 LILRA6Q6PI73 481 aa15.4■□□□□ 0.06
VARS-226ENST00000483275 GRASPQ7Z6J2 395 aaPredicted RBP15.4■□□□□ 0.06
VARS-226ENST00000483275 NOSTRINQ8IVI9 506 aa15.4■□□□□ 0.06
VARS-226ENST00000483275 MTMR9Q96QG7 549 aa15.4■□□□□ 0.06
VARS-226ENST00000483275 SNTG2Q9NY99 539 aa15.4■□□□□ 0.06
VARS-226ENST00000483275 R4GN57 208 aa15.4■□□□□ 0.06
VARS-226ENST00000483275 SF3B1O75533 1304 aaKnown RBP eCLIP15.4■□□□□ 0.06
VARS-226ENST00000483275 FANCMQ8IYD8 2048 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 PATJQ8NI35 1801 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 LRRN2O75325 713 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 SRFP11831 508 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 LAMP2P13473 410 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 POU5F1BQ06416 359 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 FAM171A1Q5VUB5 890 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 EEF1DP3Q658K8 133 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 CDCA2Q69YH5 1023 aaPredicted RBP15.39■□□□□ 0.05
VARS-226ENST00000483275 ELMSAN1Q6PJG2 1045 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 CATSPER3Q86XQ3 398 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 RTP3Q9BQQ7 232 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 NFKBIZQ9BYH8 718 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 PRKD2Q9BZL6 878 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 FOXQ1Q9C009 403 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 GDAQ9Y2T3 454 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 CEP250Q9BV73 2442 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 OTOGLQ3ZCN5 2332 aa15.39■□□□□ 0.05
VARS-226ENST00000483275 CCL16O15467 120 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 ZMYND10O75800 440 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 FSHRP23945 695 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 TUSC3Q13454 348 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 PSMD5Q16401 504 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 GLRA4Q5JXX5 417 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 FGF14Q92915 247 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 CLSTN3Q9BQT9 956 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 TTPALQ9BTX7 342 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 PLEKHA4Q9H4M7 779 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 ARHGEF3Q9NR81 526 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.38■□□□□ 0.05
VARS-226ENST00000483275 PRMT7Q9NVM4 692 aaPredicted RBP15.38■□□□□ 0.05
VARS-226ENST00000483275 HCFC1R1Q9NWW0 138 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 ZDHHC7Q9NXF8 308 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 FNIP2Q9P278 1114 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 WNT16Q9UBV4 365 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 FBXW11Q9UKB1 542 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 POLIQ9UNA4 740 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 GPR179Q6PRD1 2367 aa15.38■□□□□ 0.05
VARS-226ENST00000483275 ANHXE9PGG2 379 aa15.37■□□□□ 0.05
VARS-226ENST00000483275 I3L4J1 428 aa15.37■□□□□ 0.05
VARS-226ENST00000483275 PRKCBP05771 671 aa15.37■□□□□ 0.05
VARS-226ENST00000483275 PRPF4BQ13523 1007 aaKnown RBP15.37■□□□□ 0.05
VARS-226ENST00000483275 TRIM29Q14134 588 aa15.37■□□□□ 0.05
VARS-226ENST00000483275 ANKRD1Q15327 319 aa15.37■□□□□ 0.05
VARS-226ENST00000483275 PARM1Q6UWI2 310 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms