RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 KBTBD2Q8IY47 623 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 SLC35C1Q96A29 364 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 SLC4A9Q96Q91 983 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 ZSWIM1Q9BR11 485 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 SPZ1Q9BXG8 430 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 PHF24Q9UPV7 400 aa12.62□□□□□ -0.39
VTI1A-205ENST00000483122 POTEB3A0JP26 581 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 POTECB2RU33 542 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 PDLIM1O00151 329 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 CAPN9O14815 690 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 COQ9O75208 318 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 TBX10O75333 385 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 ZCCHC18P0CG32 403 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 TSPY3P0CV98 308 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 TSPY8P0CW00 308 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 RASSF2P50749 326 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 MCL1Q07820 350 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 MYBPC3Q14896 1274 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 KPNB1Q14974 876 aaKnown RBP12.61□□□□□ -0.39
VTI1A-205ENST00000483122 CYP1B1Q16678 543 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 POTEBQ6S5H4 581 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 SYCP3Q8IZU3 236 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 UBL4BQ8N7F7 174 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 HAS1Q92839 578 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 OPTNQ96CV9 577 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 MKNK2Q9HBH9 465 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 NINJ2Q9NZG7 142 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 GRID1Q9ULK0 1009 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 CLIC2O15247 247 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 THAP12O43422 761 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 ASMTLO95671 621 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 KRT18P05783 430 aaKnown RBP12.61□□□□□ -0.39
VTI1A-205ENST00000483122 FAM163BP0C2L3 166 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 SPATA31D3P0C874 917 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 TNFAIP3P21580 790 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 LMNB2Q03252 620 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 ARSHQ5FYA8 562 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 SPATA31D4Q6ZUB0 917 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 SDCCAG8Q86SQ7 713 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-205ENST00000483122 NCAPG2Q86XI2 1143 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 COA7Q96BR5 231 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 FAM192AQ9GZU8 254 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 DNAAF2Q9NVR5 837 aaKnown RBP12.61□□□□□ -0.39
VTI1A-205ENST00000483122 LGALS13Q9UHV8 139 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 RPL26L1Q9UNX3 145 aaKnown RBP12.61□□□□□ -0.39
VTI1A-205ENST00000483122 TRAF3IP3Q9Y228 551 aa12.61□□□□□ -0.39
VTI1A-205ENST00000483122 ANKRD62A6NC57 917 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 FAM47DPA6NHR8 397 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 MAGEB2O15479 319 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 ZSCAN9O15535 394 aaPredicted RBP12.6□□□□□ -0.39
VTI1A-205ENST00000483122 ECEL1O95672 775 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 IMPDH2P12268 514 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 COMTP21964 271 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 CDR2Q01850 454 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 KRT17Q04695 432 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 SLC34A1Q06495 639 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 TMED2Q15363 201 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 TRIP13Q15645 432 aaPredicted RBP12.6□□□□□ -0.39
VTI1A-205ENST00000483122 RASIP1Q5U651 963 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 SESTD1Q86VW0 696 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 SLC13A5Q86YT5 568 aaPredicted RBP12.6□□□□□ -0.39
VTI1A-205ENST00000483122 UPF1Q92900 1129 aaKnown RBP eCLIP12.6□□□□□ -0.398e-7■■■■■ 27.8
VTI1A-205ENST00000483122 LZTS2Q9BRK4 669 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 GPR88Q9GZN0 384 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 UBA5Q9GZZ9 404 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 PREBQ9HCU5 417 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 PDP2Q9P2J9 529 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 ATXN10Q9UBB4 475 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 ZFP69BQ9UJL9 534 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 DNAJC12Q9UKB3 198 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 MIF4GDA9UHW6 222 aaKnown RBP12.6□□□□□ -0.39
VTI1A-205ENST00000483122 RASA4BC9J798 803 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 RASA4O43374 803 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 EDF1O60869 148 aaKnown RBP12.6□□□□□ -0.39
VTI1A-205ENST00000483122 PSMG1O95456 288 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 ETS2P15036 469 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 PRDX5P30044 214 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 NEK3P51956 506 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 MESDQ14696 234 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 KNOP1Q1ED39 458 aaKnown RBP12.6□□□□□ -0.39
VTI1A-205ENST00000483122 WDR72Q3MJ13 1102 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 C12orf60Q5U649 245 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 C1orf54Q8WWF1 131 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 BCAS3Q9H6U6 928 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 KRT82Q9NSB4 513 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 WHRNQ9P202 907 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 ASIC3Q9UHC3 531 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 PCDHB13Q9Y5F0 798 aa12.6□□□□□ -0.39
VTI1A-205ENST00000483122 TCEA3O75764 348 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 GGPS1O95749 300 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 DLATP10515 647 aaKnown RBP12.59□□□□□ -0.39
VTI1A-205ENST00000483122 TNNI2P48788 182 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 ITGA8P53708 1063 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 AP1B1Q10567 949 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 ITPK1Q13572 414 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 CTC1Q2NKJ3 1217 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 RNF207Q6ZRF8 634 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 NLRP9Q7RTR0 991 aa12.59□□□□□ -0.39
VTI1A-205ENST00000483122 MTDHQ86UE4 582 aaKnown RBP12.59□□□□□ -0.39
VTI1A-205ENST00000483122 RBM12BQ8IXT5 1001 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms