RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 TUSC3Q13454 348 aa18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 TDGQ13569 410 aa18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 HSP90AA2PQ14568 343 aaPredicted RBP18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 NBR1Q14596 966 aa18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 HAUS3Q68CZ6 603 aa18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 HASPINQ8TF76 798 aa18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 SMG7Q92540 1137 aaKnown RBP18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 ATOH1Q92858 354 aaPredicted RBP18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 ADPGKQ9BRR6 497 aa18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 KCNK12Q9HB15 430 aa18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 PIDD1Q9HB75 910 aa18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 LRWD1Q9UFC0 647 aa18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 NOL7Q9UMY1 257 aaKnown RBP18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 PLXNA3P51805 1871 aa18.3■□□□□ 0.52
RAB11FIP3-209ENST00000483002 ACKR2O00590 384 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 TGM5O43548 720 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 THP07101 528 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 NAMPTP43490 491 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 PPP2R5AQ15172 486 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 ECM1Q16610 540 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 PRSS55Q6UWB4 352 aaPredicted RBP18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 CYP26C1Q6V0L0 522 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 C4orf32Q8N8J7 132 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 TMEM105Q8N8V8 129 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 KIFC3Q9BVG8 833 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 IRF2BPLQ9H1B7 796 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 CXCL16Q9H2A7 254 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 BHMT2Q9H2M3 363 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 PLEKHA4Q9H4M7 779 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 WDR6Q9NNW5 1121 aaKnown RBP18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 FNIP2Q9P278 1114 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 KIAA1024Q9UPX6 916 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 ZMYM2Q9UBW7 1377 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 DENND4AQ7Z401 1863 aa18.29■□□□□ 0.52
RAB11FIP3-209ENST00000483002 PTGESO14684 152 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 N4BP1O75113 896 aaKnown RBP18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 RECQL4O94761 1208 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 EDN1P05305 212 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 MUTP22033 750 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 TRAPPC10P48553 1259 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 FXR2P51116 673 aaKnown RBP eCLIP18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 EEF1DP3Q658K8 133 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 ASTLQ6HA08 431 aaPredicted RBP18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 CEP57Q86XR8 500 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 GPR65Q8IYL9 337 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 HDAC7Q8WUI4 952 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 STAMQ92783 540 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 IFT74Q96LB3 600 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 CCDC113Q9H0I3 377 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 NT5C3AQ9H0P0 336 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 SH2B1Q9NRF2 756 aaPredicted RBP18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 GDAQ9Y2T3 454 aa18.28■□□□□ 0.52
RAB11FIP3-209ENST00000483002 MTCL1Q9Y4B5 1905 aaKnown RBP18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 CLUHO75153 1309 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 SF3B1O75533 1304 aaKnown RBP eCLIP18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 GALR2O43603 387 aaPredicted RBP18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 NUBP1P53384 320 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 CREMQ03060 361 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 PTGDRQ13258 359 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 RTP2Q5QGT7 225 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 FAM171A1Q5VUB5 890 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 LILRA6Q6PI73 481 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 FLCNQ8NFG4 579 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 RSAD2Q8WXG1 361 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 ZNF707Q96C28 371 aaPredicted RBP18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 KIF2CQ99661 725 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 TTPALQ9BTX7 342 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 RHOBTB2Q9BYZ6 727 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 DDX19AQ9NUU7 478 aaKnown RBP18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 IGSF9Q9P2J2 1179 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 FBXL21Q9UKT6 434 aa18.27■□□□□ 0.52
RAB11FIP3-209ENST00000483002 KIF4AO95239 1232 aa18.26■□□□□ 0.51
RAB11FIP3-209ENST00000483002 C1RP00736 705 aa18.26■□□□□ 0.51
RAB11FIP3-209ENST00000483002 TOB1P50616 345 aaPredicted RBP18.26■□□□□ 0.51
RAB11FIP3-209ENST00000483002 EFNA5P52803 228 aa18.26■□□□□ 0.51
RAB11FIP3-209ENST00000483002 PDIA5Q14554 519 aa18.26■□□□□ 0.51
RAB11FIP3-209ENST00000483002 SNX29Q8TEQ0 813 aa18.26■□□□□ 0.51
RAB11FIP3-209ENST00000483002 KIFAP3Q92845 792 aa18.26■□□□□ 0.51
RAB11FIP3-209ENST00000483002 MYADMQ96S97 322 aa18.26■□□□□ 0.51
RAB11FIP3-209ENST00000483002 PRKD2Q9BZL6 878 aa18.26■□□□□ 0.51
RAB11FIP3-209ENST00000483002 ZDHHC7Q9NXF8 308 aa18.26■□□□□ 0.51
RAB11FIP3-209ENST00000483002 PCDHB6Q9Y5E3 794 aa18.26■□□□□ 0.51
RAB11FIP3-209ENST00000483002 ZFHX2Q9C0A1 2572 aaPredicted RBP18.26■□□□□ 0.51
RAB11FIP3-209ENST00000483002 PTPRZ1P23471 2315 aaPredicted RBP18.26■□□□□ 0.51
RAB11FIP3-209ENST00000483002 K7ERI5 159 aa18.25■□□□□ 0.51
RAB11FIP3-209ENST00000483002 NARSO43776 548 aaKnown RBP18.25■□□□□ 0.51
RAB11FIP3-209ENST00000483002 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.51
RAB11FIP3-209ENST00000483002 CLCN5P51795 746 aa18.25■□□□□ 0.51
RAB11FIP3-209ENST00000483002 NT5DC1Q5TFE4 455 aa18.25■□□□□ 0.51
RAB11FIP3-209ENST00000483002 ATF7IP2Q5U623 682 aa18.25■□□□□ 0.51
RAB11FIP3-209ENST00000483002 LNX1Q8TBB1 728 aaPredicted RBP18.25■□□□□ 0.51
RAB11FIP3-209ENST00000483002 CLSTN3Q9BQT9 956 aa18.25■□□□□ 0.51
RAB11FIP3-209ENST00000483002 RAB34Q9BZG1 259 aa18.25■□□□□ 0.51
RAB11FIP3-209ENST00000483002 DUSP12Q9UNI6 340 aa18.25■□□□□ 0.51
RAB11FIP3-209ENST00000483002 DOCK6Q96HP0 2047 aa18.25■□□□□ 0.51
RAB11FIP3-209ENST00000483002 CCDC169A6NNP5 214 aa18.24■□□□□ 0.51
RAB11FIP3-209ENST00000483002 E9PMD0 336 aa18.24■□□□□ 0.51
RAB11FIP3-209ENST00000483002 ZMYND10O75800 440 aa18.24■□□□□ 0.51
RAB11FIP3-209ENST00000483002 CDC25AP30304 524 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms