RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ZNF543Q08ER8 600 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 INF2Q27J81 1249 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 SGO2Q562F6 1265 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 FAM102BQ5T8I3 360 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 ICE2Q659A1 982 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 CNNM4Q6P4Q7 775 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 COL23A1Q86Y22 540 aaPredicted RBP8.52□□□□□ -1.05
SNX13-208ENST00000482558 SLITRK4Q8IW52 837 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 SMAP1Q8IYB5 467 aaPredicted RBP8.52□□□□□ -1.05
SNX13-208ENST00000482558 UBR7Q8N806 425 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 SLC44A5Q8NCS7 719 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 ST13P5Q8NFI4 369 aaPredicted RBP8.52□□□□□ -1.05
SNX13-208ENST00000482558 CUL5Q93034 780 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 ERO1AQ96HE7 468 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 PPP1R13BQ96KQ4 1090 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 CAMKK2Q96RR4 588 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 C7orf25Q9BPX7 421 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 THAP9Q9H5L6 903 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 PTPRHQ9HD43 1115 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 ADD3Q9UEY8 706 aaKnown RBP8.52□□□□□ -1.05
SNX13-208ENST00000482558 PPT2Q9UMR5 302 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 MAPRE3Q9UPY8 281 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 BRWD3Q6RI45 1802 aa8.52□□□□□ -1.05
SNX13-208ENST00000482558 ANKRD31Q8N7Z5 1873 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 PVALEFA0A1B0GWK0 134 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 A0A1W2PQC6 194 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 ZBTB5O15062 677 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 CCNT1O60563 726 aaKnown RBP8.51□□□□□ -1.05
SNX13-208ENST00000482558 ENTPD3O75355 529 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 KIF20AO95235 890 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 MMP10P09238 476 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 CALRP27797 417 aaKnown RBP8.51□□□□□ -1.05
SNX13-208ENST00000482558 CRKP46108 304 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 ARL4DP49703 201 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 SNAP47Q5SQN1 464 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 E4F1Q66K89 784 aaPredicted RBP8.51□□□□□ -1.05
SNX13-208ENST00000482558 APOBEC3HQ6NTF7 200 aaKnown RBP8.51□□□□□ -1.05
SNX13-208ENST00000482558 CDC42EP5Q6NZY7 148 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 MOXD1Q6UVY6 613 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 SPATC1Q76KD6 591 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 NECAB2Q7Z6G3 386 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 CABP7Q86V35 215 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 C2CD5Q86YS7 1000 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 TMTC1Q8IUR5 882 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 ADSSL1Q8N142 457 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 AFAP1L2Q8N4X5 818 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 FBXL6Q8N531 539 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 IGSF22Q8N9C0 903 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 SMG8Q8ND04 991 aaKnown RBP8.51□□□□□ -1.05
SNX13-208ENST00000482558 GIMAP8Q8ND71 665 aaPredicted RBP8.51□□□□□ -1.05
SNX13-208ENST00000482558 RIN3Q8TB24 985 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 SLC7A3Q8WY07 619 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 MTMR8Q96EF0 704 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 GPR101Q96P66 508 aaPredicted RBP8.51□□□□□ -1.05
SNX13-208ENST00000482558 PIGSQ96S52 555 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 NUP58Q9BVL2 599 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 L2HGDHQ9H9P8 463 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 AS3MTQ9HBK9 375 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 CGNQ9P2M7 1197 aaKnown RBP8.51□□□□□ -1.05
SNX13-208ENST00000482558 ZMYM5Q9UJ78 669 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 TPX2Q9ULW0 747 aaKnown RBP8.51□□□□□ -1.05
SNX13-208ENST00000482558 ABCB11O95342 1321 aa8.51□□□□□ -1.05
SNX13-208ENST00000482558 MYH8P13535 1937 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 N4BP3O15049 544 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 SLU7O95391 586 aaKnown RBP8.5□□□□□ -1.05
SNX13-208ENST00000482558 TIAF1O95411 115 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 GJB6O95452 261 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 F2P00734 622 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 CCDC175P0C221 793 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 FAM163BP0C2L3 166 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 GARTP22102 1010 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 SHMT1P34896 483 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 PBX1P40424 430 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 CASP2P42575 452 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 LIG3P49916 1009 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 USP11P51784 963 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 AP3B2Q13367 1082 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 PICALMQ13492 652 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 KCTD2Q14681 263 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 IL17AQ16552 155 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 CALCRLQ16602 461 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 ZNF423Q2M1K9 1284 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 LETM2Q2VYF4 491 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 ALFQ53S48 1182 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 TCP11X2Q5H9J9 407 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 KRT79Q5XKE5 535 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 TTBK2Q6IQ55 1244 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 ARHGAP27Q6ZUM4 889 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 TMEM179Q6ZVK1 233 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 PASD1Q8IV76 773 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 TP53INP2Q8IXH6 220 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 GRAMD1CQ8IYS0 662 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 AGBL5Q8NDL9 886 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 GMCL1P1Q8NEA9 526 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 CXorf38Q8TB03 319 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 TBCKQ8TEA7 893 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 NELFBQ8WX92 580 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 ANKRD7Q92527 254 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 DPF2Q92785 391 aa8.5□□□□□ -1.05
SNX13-208ENST00000482558 CDK5RAP3Q96JB5 506 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms