RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 ZNF662Q6ZS27 426 aa9.78□□□□□ -0.84
CALD1-220ENST00000482470 NLRP14Q86W24 1093 aa9.78□□□□□ -0.84
CALD1-220ENST00000482470 RHPN2Q8IUC4 686 aa9.78□□□□□ -0.84
CALD1-220ENST00000482470 LRRC71Q8N4P6 559 aa9.78□□□□□ -0.84
CALD1-220ENST00000482470 CCDC89Q8N998 374 aa9.78□□□□□ -0.84
CALD1-220ENST00000482470 INPP4AQ96PE3 977 aaPredicted RBP9.78□□□□□ -0.84
CALD1-220ENST00000482470 CCT8L2Q96SF2 557 aa9.78□□□□□ -0.84
CALD1-220ENST00000482470 PSMD1Q99460 953 aa9.78□□□□□ -0.84
CALD1-220ENST00000482470 ELAC2Q9BQ52 826 aaKnown RBP9.78□□□□□ -0.84
CALD1-220ENST00000482470 ERP44Q9BS26 406 aa9.78□□□□□ -0.84
CALD1-220ENST00000482470 MRIQ9BWK5 157 aa9.78□□□□□ -0.84
CALD1-220ENST00000482470 HOXC10Q9NYD6 342 aa9.78□□□□□ -0.84
CALD1-220ENST00000482470 GGA3Q9NZ52 723 aa9.78□□□□□ -0.84
CALD1-220ENST00000482470 GLI3P10071 1580 aa9.78□□□□□ -0.84
CALD1-220ENST00000482470 PIK3R2O00459 728 aa9.77□□□□□ -0.84
CALD1-220ENST00000482470 DGAT1O75907 488 aa9.77□□□□□ -0.84
CALD1-220ENST00000482470 COL4A1P02462 1669 aa9.77□□□□□ -0.84
CALD1-220ENST00000482470 MDH1P40925 334 aaKnown RBP9.77□□□□□ -0.84
CALD1-220ENST00000482470 ACTR2P61160 394 aa9.77□□□□□ -0.84
CALD1-220ENST00000482470 PPP2R2AP63151 447 aa9.77□□□□□ -0.84
CALD1-220ENST00000482470 SLC29A2Q14542 456 aa9.77□□□□□ -0.84
CALD1-220ENST00000482470 SUPT20HL1Q3ZLR7 823 aa9.77□□□□□ -0.84
CALD1-220ENST00000482470 BTNL9Q6UXG8 535 aa9.77□□□□□ -0.84
CALD1-220ENST00000482470 AGBL3Q8NEM8 1001 aa9.77□□□□□ -0.84
CALD1-220ENST00000482470 VTI1AQ96AJ9 217 aa9.77□□□□□ -0.84
CALD1-220ENST00000482470 PLIN4Q96Q06 1357 aa9.77□□□□□ -0.84
CALD1-220ENST00000482470 HOMER3Q9NSC5 361 aa9.77□□□□□ -0.84
CALD1-220ENST00000482470 BAIAP2L1Q9UHR4 511 aa9.77□□□□□ -0.84
CALD1-220ENST00000482470 ASTN2O75129 1339 aaPredicted RBP9.77□□□□□ -0.85
CALD1-220ENST00000482470 A0A087WUV0 522 aaPredicted RBP9.77□□□□□ -0.85
CALD1-220ENST00000482470 HLA-DRAP01903 254 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 TNNC2P02585 160 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 CYP11B1P15538 503 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 CHRNA3P32297 505 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 PSEN1P49768 467 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 TTMPQ5BVD1 217 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 DAB2IPQ5VWQ8 1189 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 MMS22LQ6ZRQ5 1243 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 RNF149Q8NC42 400 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 ZBTB45Q96K62 511 aaPredicted RBP9.77□□□□□ -0.85
CALD1-220ENST00000482470 APOL6Q9BWW8 343 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 CALN1Q9BXU9 219 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 PCSK1NQ9UHG2 260 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 GOLGB1Q14789 3259 aaKnown RBP9.77□□□□□ -0.85
CALD1-220ENST00000482470 PIK3CDO00329 1044 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 PODXLO00592 558 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 HSPA6P17066 643 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 HOXD13P35453 343 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 KRT17Q04695 432 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 KCTD2Q14681 263 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 ASTE1Q2TB18 679 aaPredicted RBP9.77□□□□□ -0.85
CALD1-220ENST00000482470 FAM133BQ5BKY9 247 aaKnown RBP9.77□□□□□ -0.85
CALD1-220ENST00000482470 SYCP2LQ5T4T6 812 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 FAM160B1Q5W0V3 765 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 DCPSQ96C86 337 aaKnown RBP9.77□□□□□ -0.85
CALD1-220ENST00000482470 C9orf72Q96LT7 481 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 CARD9Q9H257 536 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 PXMP2Q9NR77 195 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 AKT3Q9Y243 479 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 CACNA1SQ13698 1873 aa9.77□□□□□ -0.85
CALD1-220ENST00000482470 GMNCA6NCL1 334 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 TULP2O00295 520 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 OPLAHO14841 1288 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 CSDE1O75534 798 aaKnown RBP9.76□□□□□ -0.85
CALD1-220ENST00000482470 STAM2O75886 525 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 WEE2P0C1S8 567 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 GRM1Q13255 1194 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 TMED2Q15363 201 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 LONRF1Q17RB8 773 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 TADA2BQ86TJ2 420 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 NOP9Q86U38 636 aaKnown RBP9.76□□□□□ -0.85
CALD1-220ENST00000482470 EFCAB13Q8IY85 973 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 ACTRT1Q8TDG2 376 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 MAIP1Q8WWC4 291 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 RSAD2Q8WXG1 361 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 CALR3Q96L12 384 aaKnown RBP9.76□□□□□ -0.85
CALD1-220ENST00000482470 PLCD4Q9BRC7 762 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 WNT8AQ9H1J5 351 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 TMEM8AQ9HCN3 771 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 MRPL47Q9HD33 250 aaKnown RBP9.76□□□□□ -0.85
CALD1-220ENST00000482470 STK38LQ9Y2H1 464 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 RIPK3Q9Y572 518 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 GTPBP10A4D1E9 387 aaKnown RBP9.76□□□□□ -0.85
CALD1-220ENST00000482470 KLRG2A4D1S0 409 aaPredicted RBP9.76□□□□□ -0.85
CALD1-220ENST00000482470 GJB6O95452 261 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 ADRB2P07550 413 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 RRM1P23921 792 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 EMC2Q15006 297 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 CDO1Q16878 200 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 FBXW10Q5XX13 1052 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 GRK7Q8WTQ7 553 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 IQCGQ9H095 443 aaKnown RBP9.76□□□□□ -0.85
CALD1-220ENST00000482470 FBXO40Q9UH90 709 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 NR2E1Q9Y466 385 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.76□□□□□ -0.85
CALD1-220ENST00000482470 GGPS1O95749 300 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 CLTAP09496 248 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 PYGMP11217 842 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 FLT3P36888 993 aa9.76□□□□□ -0.85
CALD1-220ENST00000482470 PRKCIP41743 596 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms