RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 IWS1Q96ST2 819 aa4.75□□□□□ -1.65
VPS41-212ENST00000482217 MYD88Q99836 296 aa4.75□□□□□ -1.65
VPS41-212ENST00000482217 SGPP1Q9BX95 441 aa4.75□□□□□ -1.65
VPS41-212ENST00000482217 RANBP17Q9H2T7 1088 aaKnown RBP4.75□□□□□ -1.65
VPS41-212ENST00000482217 INCENPQ9NQS7 918 aa4.75□□□□□ -1.65
VPS41-212ENST00000482217 MAN1C1Q9NR34 630 aa4.75□□□□□ -1.65
VPS41-212ENST00000482217 ATP8A2Q9NTI2 1148 aa4.75□□□□□ -1.65
VPS41-212ENST00000482217 TBC1D22BQ9NU19 505 aa4.75□□□□□ -1.65
VPS41-212ENST00000482217 TRMT13Q9NUP7 481 aaKnown RBP4.75□□□□□ -1.65
VPS41-212ENST00000482217 RAPGEFL1Q9UHV5 662 aa4.75□□□□□ -1.65
VPS41-212ENST00000482217 ZNF112Q9UJU3 913 aa4.75□□□□□ -1.65
VPS41-212ENST00000482217 PNMA8BQ9ULN7 279 aaPredicted RBP4.75□□□□□ -1.65
VPS41-212ENST00000482217 SPEF1Q9Y4P9 236 aa4.75□□□□□ -1.65
VPS41-212ENST00000482217 KCTD3Q9Y597 815 aa4.75□□□□□ -1.65
VPS41-212ENST00000482217 LRRFIP2Q9Y608 721 aaKnown RBP4.75□□□□□ -1.65
VPS41-212ENST00000482217 PRAMEF22A3QJZ6 481 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 FZD9O00144 591 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 NCAM2O15394 837 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 CYP7B1O75881 506 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 PRLP01236 227 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 XPAP23025 273 aaPredicted RBP4.74□□□□□ -1.65
VPS41-212ENST00000482217 CASQ1P31415 396 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 KIF5BP33176 963 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 MC3RP41968 323 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 EPHB3P54753 998 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 NCKAP1LP55160 1127 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 UBASH3AP57075 661 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 ERVK-21P61565 698 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 KRT83P78385 493 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 FOXO4P98177 505 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 ALDH6A1Q02252 535 aaKnown RBP4.74□□□□□ -1.65
VPS41-212ENST00000482217 MAP2K1Q02750 393 aaPredicted RBP4.74□□□□□ -1.65
VPS41-212ENST00000482217 ROM1Q03395 351 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 KIF22Q14807 665 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 PTPN14Q15678 1187 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 ZKSCAN8Q15776 578 aaPredicted RBP4.74□□□□□ -1.65
VPS41-212ENST00000482217 SKIDA1Q1XH10 827 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 INTS11Q5TA45 600 aaKnown RBP4.74□□□□□ -1.65
VPS41-212ENST00000482217 TCERG1LQ5VWI1 586 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 PRAMEF18Q5VWM3 479 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 NUGGCQ68CJ6 796 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 TIGD7Q6NT04 549 aaPredicted RBP4.74□□□□□ -1.65
VPS41-212ENST00000482217 RETSATQ6NUM9 610 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 CPLX2Q6PUV4 134 aaKnown RBP4.74□□□□□ -1.65
VPS41-212ENST00000482217 CYP26C1Q6V0L0 522 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 LIPIQ6XZB0 460 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 ESPNLQ6ZVH7 1005 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 TTLL6Q8N841 843 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 LINC00482Q8N8I6 264 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 STON2Q8WXE9 905 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 CCT6BQ92526 530 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 RTF1Q92541 710 aaKnown RBP4.74□□□□□ -1.65
VPS41-212ENST00000482217 ERCC4Q92889 916 aaPredicted RBP4.74□□□□□ -1.65
VPS41-212ENST00000482217 RSRC1Q96IZ7 334 aaKnown RBP4.74□□□□□ -1.65
VPS41-212ENST00000482217 SGCZQ96LD1 299 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 ACAP3Q96P50 834 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 GORASP1Q9BQQ3 440 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 WNT8AQ9H1J5 351 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 DHX36Q9H2U1 1008 aaKnown RBP4.74□□□□□ -1.65
VPS41-212ENST00000482217 DBNDD1Q9H9R9 158 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 PLEKHA5Q9HAU0 1116 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 SLC39A2Q9NP94 309 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 VPS45Q9NRW7 570 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 GALNT8Q9NY28 637 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 STAP2Q9UGK3 403 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 MSRAQ9UJ68 235 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 WASF3Q9UPY6 502 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 DNM3Q9UQ16 869 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 PA2G4Q9UQ80 394 aaKnown RBP4.74□□□□□ -1.65
VPS41-212ENST00000482217 CRYL1Q9Y2S2 319 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 GPRASP1Q5JY77 1395 aa4.74□□□□□ -1.65
VPS41-212ENST00000482217 BOLA2-SMG1P6H3BVE0 249 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 RTCAO00442 366 aaKnown RBP4.73□□□□□ -1.65
VPS41-212ENST00000482217 KDM1AO60341 852 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 MAFO75444 373 aaPredicted RBP4.73□□□□□ -1.65
VPS41-212ENST00000482217 MPIG6BO95866 241 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 CHGBP05060 677 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 ZKSCAN1P17029 563 aaPredicted RBP4.73□□□□□ -1.65
VPS41-212ENST00000482217 MC4RP32245 332 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 HPDP32754 393 aaPredicted RBP4.73□□□□□ -1.65
VPS41-212ENST00000482217 IL6STP40189 918 aaPredicted RBP4.73□□□□□ -1.65
VPS41-212ENST00000482217 IARSP41252 1262 aaKnown RBP4.73□□□□□ -1.65
VPS41-212ENST00000482217 SSR1P43307 286 aaKnown RBP4.73□□□□□ -1.65
VPS41-212ENST00000482217 ITGA1P56199 1179 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 HMGN5P82970 282 aaKnown RBP4.73□□□□□ -1.65
VPS41-212ENST00000482217 KLF1Q13351 362 aaPredicted RBP4.73□□□□□ -1.65
VPS41-212ENST00000482217 ADAM9Q13443 819 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 MOGSQ13724 837 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 ODF1Q14990 250 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 PCBP2Q15366 365 aaKnown RBP eCLIP4.73□□□□□ -1.65
VPS41-212ENST00000482217 PARP10Q53GL7 1025 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 GALNT17Q6IS24 598 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 TMC5Q6UXY8 1006 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 DPP8Q6V1X1 898 aaPredicted RBP4.73□□□□□ -1.65
VPS41-212ENST00000482217 FASTKD5Q7L8L6 764 aaKnown RBP4.73□□□□□ -1.65
VPS41-212ENST00000482217 CARNMT1Q8N4J0 409 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 MYCT1Q8N699 235 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 KYQ8NBH2 561 aa4.73□□□□□ -1.65
VPS41-212ENST00000482217 LILRB1Q8NHL6 650 aaPredicted RBP4.73□□□□□ -1.65
VPS41-212ENST00000482217 ANP32BQ92688 251 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms