RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 MRPL17Q9NRX2 175 aaKnown RBP13.05□□□□□ -0.32
HMGN1-213ENST00000482192 STK17AQ9UEE5 414 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 SSX2IPQ9Y2D8 614 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 GDAQ9Y2T3 454 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 HCFC2Q9Y5Z7 792 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 XIRP2A4UGR9 3374 aa13.05□□□□□ -0.32
HMGN1-213ENST00000482192 PTGESO14684 152 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 TBCAO75347 108 aaKnown RBP13.04□□□□□ -0.32
HMGN1-213ENST00000482192 FAM13AO94988 1023 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 URODP06132 367 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 THP07101 528 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 MAPTP10636 758 aaKnown RBP13.04□□□□□ -0.32
HMGN1-213ENST00000482192 MCF2P10911 925 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 HOXB8P17481 243 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-213ENST00000482192 PROZP22891 400 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 SSTR3P32745 418 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-213ENST00000482192 DDIT3P35638 169 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 GRM5P41594 1212 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 ZNF131P52739 623 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 YARSP54577 528 aaKnown RBP13.04□□□□□ -0.32
HMGN1-213ENST00000482192 NCKAP1LP55160 1127 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 ZP2Q05996 745 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 MCM6Q14566 821 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 SPECC1Q5M775 1068 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 ANKRD54Q6NXT1 300 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 MPZL3Q6UWV2 235 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 ZPBP2Q6X784 338 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 USP49Q70CQ1 688 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 PPFIBP1Q86W92 1011 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 RNF168Q8IYW5 571 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-213ENST00000482192 ZNF396Q96N95 335 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-213ENST00000482192 CLIC6Q96NY7 704 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 POP1Q99575 1024 aaKnown RBP13.04□□□□□ -0.32
HMGN1-213ENST00000482192 TCHPQ9BT92 498 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 HERC2P3Q9BVR0 1158 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 CCDC94Q9BW85 323 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-213ENST00000482192 TARS2Q9BW92 718 aaKnown RBP13.04□□□□□ -0.32
HMGN1-213ENST00000482192 CDT1Q9H211 546 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 PARVGQ9HBI0 331 aa13.04□□□□□ -0.32
HMGN1-213ENST00000482192 TOPORSQ9NS56 1045 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-213ENST00000482192 USP15Q9Y4E8 981 aaPredicted RBP13.04□□□□□ -0.32
HMGN1-213ENST00000482192 F8W810 466 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 TOM1L1O75674 476 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 BRD1O95696 1058 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 EFEMP2O95967 443 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 ZSCAN22P10073 491 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-213ENST00000482192 GLUD2P49448 558 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 HSP90AA2PQ14568 343 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-213ENST00000482192 STK38Q15208 465 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 KIAA1841Q6NSI8 718 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 HAUS6Q7Z4H7 955 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 ZBTB33Q86T24 672 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 MYCT1Q8N699 235 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 KCNN1Q92952 543 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 CD320Q9NPF0 282 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 ANKFY1Q9P2R3 1169 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 ADAM28Q9UKQ2 775 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 VCANP13611 3396 aa13.03□□□□□ -0.32
HMGN1-213ENST00000482192 TCF20Q9UGU0 1960 aaKnown RBP13.03□□□□□ -0.32
HMGN1-213ENST00000482192 CASTOR2A6NHX0 329 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 K7ENM7 598 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 ABLIM1O14639 778 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 TRAK2O60296 914 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 LILRB3O75022 631 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 TADA2AO75478 443 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 CNPP09543 421 aaKnown RBP13.02□□□□□ -0.33
HMGN1-213ENST00000482192 ABCD1P33897 745 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 OSTNP61366 133 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 NAB2Q15742 525 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 TPRNQ4KMQ1 711 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 RRAGBQ5VZM2 374 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 FUT10Q6P4F1 479 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 SYCE2Q6PIF2 218 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 CCDC73Q6ZRK6 1079 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 CEP120Q8N960 986 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 LINC00301Q8NCQ3 95 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 SLC22A17Q8WUG5 538 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 RABGGTAQ92696 567 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 KLHL5Q96PQ7 755 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 PAAF1Q9BRP4 392 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 S1PR5Q9H228 398 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 CXCL16Q9H2A7 254 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 ZHX3Q9H4I2 956 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 DZANK1Q9NVP4 752 aa13.02□□□□□ -0.33
HMGN1-213ENST00000482192 SF3B1O75533 1304 aaKnown RBP eCLIP13.02□□□□□ -0.334e-6■□□□□ 8.6
HMGN1-213ENST00000482192 SPTBN5Q9NRC6 3674 aaKnown RBP13.01□□□□□ -0.33
HMGN1-213ENST00000482192 C2CD2LO14523 706 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 HNRNPDLO14979 420 aaKnown RBP13.01□□□□□ -0.33
HMGN1-213ENST00000482192 SPTLC2O15270 562 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 CLDN3O15551 220 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 PPP6R2O75170 966 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 KIF4AO95239 1232 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 YEATS4O95619 227 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 F13A1P00488 732 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 ADH1AP07327 375 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 HARSP12081 509 aaKnown RBP13.01□□□□□ -0.33
HMGN1-213ENST00000482192 EPCAMP16422 314 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 KLRC2P26717 231 aa13.01□□□□□ -0.33
HMGN1-213ENST00000482192 STAT6P42226 847 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms